RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FOSL2P15408 326 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 TOB1P50616 345 aaPredicted RBP19.83■□□□□ 0.76
PTPN7-209ENST00000477554 CALCRLQ16602 461 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 FAM184AQ8NB25 1140 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 RDM1Q8NG50 284 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 ZBED2Q9BTP6 218 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 SUGCTQ9HAC7 445 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 BMP2KQ9NSY1 1161 aaPredicted RBP19.83■□□□□ 0.76
PTPN7-209ENST00000477554 MTUS1Q9ULD2 1270 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 ARID2Q68CP9 1835 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 POTEMA6NI47 508 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 TBX3O15119 743 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 NEMFO60524 1076 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 CSDE1O75534 798 aaKnown RBP19.82■□□□□ 0.76
PTPN7-209ENST00000477554 GJB2P29033 226 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 TXKP42681 527 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 IER5Q5VY09 327 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 TOP1MTQ969P6 601 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 FAM167AQ96KS9 214 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 LXNQ9BS40 222 aa19.82■□□□□ 0.76
PTPN7-209ENST00000477554 NIFKQ9BYG3 293 aaKnown RBP19.82■□□□□ 0.76
PTPN7-209ENST00000477554 KDM3AQ9Y4C1 1321 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 LINC01553A4QN01 128 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 IBSPP21815 317 aaPredicted RBP19.81■□□□□ 0.76
PTPN7-209ENST00000477554 FGFR4P22455 802 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 NOSTRINQ8IVI9 506 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 ARNTL2Q8WYA1 636 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 ADAMTS10Q9H324 1103 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 FOXP1Q9H334 677 aaPredicted RBP19.81■□□□□ 0.76
PTPN7-209ENST00000477554 TTC12Q9H892 705 aaPredicted RBP19.81■□□□□ 0.76
PTPN7-209ENST00000477554 PRDM6Q9NQX0 595 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 NRBP2Q9NSY0 501 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
PTPN7-209ENST00000477554 MARCH6O60337 910 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 AMHP03971 560 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 GATMP50440 423 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 NLRP11P59045 1033 aaKnown RBP19.8■□□□□ 0.76
PTPN7-209ENST00000477554 PSMC5P62195 406 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 HTRA4P83105 476 aaPredicted RBP19.8■□□□□ 0.76
PTPN7-209ENST00000477554 EPHA7Q15375 998 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 SAFBQ15424 915 aaKnown RBP eCLIP19.8■□□□□ 0.76
PTPN7-209ENST00000477554 XKR3Q5GH77 459 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 FAM228AQ86W67 206 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 KSR1Q8IVT5 923 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 NME8Q8N427 588 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 MAFAQ8NHW3 353 aaPredicted RBP19.8■□□□□ 0.76
PTPN7-209ENST00000477554 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
PTPN7-209ENST00000477554 RAD9AQ99638 391 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 ERVK-5Q9HDB9 667 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 AKT3Q9Y243 479 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 TTC3P53804 2025 aa19.8■□□□□ 0.76
PTPN7-209ENST00000477554 IGKV6-21A0A0C4DH24 114 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 SLITRK3O94933 977 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 QARSP47897 775 aaKnown RBP19.79■□□□□ 0.76
PTPN7-209ENST00000477554 TBC1D8BQ0IIM8 1120 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 NFX1Q12986 1120 aaKnown RBP19.79■□□□□ 0.76
PTPN7-209ENST00000477554 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 C4orf32Q8N8J7 132 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 PPM1EQ8WY54 764 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 APBB2Q92870 758 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 EIF2AK1Q9BQI3 630 aaKnown RBP19.79■□□□□ 0.76
PTPN7-209ENST00000477554 C17orf80Q9BSJ5 609 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 KIF3AQ9Y496 699 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 PCDHB6Q9Y5E3 794 aa19.79■□□□□ 0.76
PTPN7-209ENST00000477554 M0QZ92 97 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 LPXNO60711 386 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 EFCAB14O75071 495 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 P4HBP07237 508 aaKnown RBP19.78■□□□□ 0.76
PTPN7-209ENST00000477554 IGFBP4P22692 258 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 U2AF2P26368 475 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPN7-209ENST00000477554 PAK2Q13177 524 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 CCDC85BQ15834 202 aaPredicted RBP19.78■□□□□ 0.76
PTPN7-209ENST00000477554 TTC38Q5R3I4 469 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 TPH2Q8IWU9 490 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 SLFN12Q8IYM2 578 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 GDPD5Q8WTR4 605 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 NAP1L4Q99733 375 aaKnown RBP19.78■□□□□ 0.76
PTPN7-209ENST00000477554 RC3H2Q9HBD1 1191 aaKnown RBP19.78■□□□□ 0.76
PTPN7-209ENST00000477554 FOXD4L1Q9NU39 408 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 PCDHA12Q9UN75 941 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 ST3GAL5Q9UNP4 418 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 CEP131Q9UPN4 1083 aa19.78■□□□□ 0.76
PTPN7-209ENST00000477554 MAGEB2O15479 319 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 LINC00271P0C7V0 271 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 GPC3P51654 580 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 HSD17B14Q9BPX1 270 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 CYP26B1Q9NR63 512 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 NLRC5Q86WI3 1866 aa19.77■□□□□ 0.76
PTPN7-209ENST00000477554 KIAA1671Q9BY89 1806 aa19.77■□□□□ 0.75
PTPN7-209ENST00000477554 RPS6KA5O75582 802 aa19.76■□□□□ 0.75
PTPN7-209ENST00000477554 BAG4O95429 457 aaKnown RBP19.76■□□□□ 0.75
PTPN7-209ENST00000477554 SPATA31C1P0DKV0 1188 aa19.76■□□□□ 0.75
PTPN7-209ENST00000477554 TECP42680 631 aa19.76■□□□□ 0.75
PTPN7-209ENST00000477554 CRYBB1P53674 252 aaPredicted RBP19.76■□□□□ 0.75
PTPN7-209ENST00000477554 IL17AQ16552 155 aa19.76■□□□□ 0.75
PTPN7-209ENST00000477554 SP7Q8TDD2 431 aaPredicted RBP19.76■□□□□ 0.75
PTPN7-209ENST00000477554 TMEM143Q96AN5 459 aa19.76■□□□□ 0.75
PTPN7-209ENST00000477554 PRRC2BQ5JSZ5 2229 aaKnown RBP19.76■□□□□ 0.75
PTPN7-209ENST00000477554 MAFO75444 373 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms