RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
COMMD6-209ENST00000477377 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
COMMD6-209ENST00000477377 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 M0QZ92 97 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 IGFBP4P22692 258 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 EPHA7Q15375 998 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 FAM228AQ86W67 206 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.49■□□□□ 0.39
COMMD6-209ENST00000477377 METTL13Q8N6R0 699 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 OSMRQ99650 979 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 C17orf80Q9BSJ5 609 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
COMMD6-209ENST00000477377 RGL1Q9NZL6 768 aa17.49■□□□□ 0.39
COMMD6-209ENST00000477377 ZBTB39O15060 712 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 SLITRK3O94933 977 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 PAK2Q13177 524 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 TRIM29Q14134 588 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 MTERF2Q49AM1 385 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 PLA2G4FQ68DD2 849 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 TGS1Q96RS0 853 aaKnown RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 FTHL17Q9BXU8 183 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
COMMD6-209ENST00000477377 ST3GAL5Q9UNP4 418 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 GINS2Q9Y248 185 aa17.48■□□□□ 0.39
COMMD6-209ENST00000477377 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 MAFO75444 373 aaPredicted RBP17.47■□□□□ 0.39
COMMD6-209ENST00000477377 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 DGKIO75912 1065 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 GPC3P51654 580 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 NPEPPSP55786 919 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
COMMD6-209ENST00000477377 DSC3Q14574 896 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 SLFN12Q8IYM2 578 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 DYDC2Q96IM9 177 aa17.47■□□□□ 0.39
COMMD6-209ENST00000477377 ZNF668Q96K58 619 aaPredicted RBP17.47■□□□□ 0.39
COMMD6-209ENST00000477377 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
COMMD6-209ENST00000477377 COL4A4P53420 1690 aaPredicted RBP17.46■□□□□ 0.39
COMMD6-209ENST00000477377 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
COMMD6-209ENST00000477377 CTTNQ14247 550 aaKnown RBP17.46■□□□□ 0.39
COMMD6-209ENST00000477377 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
COMMD6-209ENST00000477377 CALCRLQ16602 461 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 C4orf32Q8N8J7 132 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 PPM1EQ8WY54 764 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 YME1L1Q96TA2 773 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
COMMD6-209ENST00000477377 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 RGS18Q9NS28 235 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 MTUS1Q9ULD2 1270 aa17.46■□□□□ 0.39
COMMD6-209ENST00000477377 C9IYK1 514 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 NEMFO60524 1076 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
COMMD6-209ENST00000477377 U2AF2P26368 475 aaKnown RBP eCLIP17.45■□□□□ 0.38
COMMD6-209ENST00000477377 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
COMMD6-209ENST00000477377 FAM189BP81408 668 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 EPC2Q52LR7 807 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
COMMD6-209ENST00000477377 LXNQ9BS40 222 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 DHX33Q9H6R0 707 aaKnown RBP17.45■□□□□ 0.38
COMMD6-209ENST00000477377 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 AKT3Q9Y243 479 aa17.45■□□□□ 0.38
COMMD6-209ENST00000477377 GPR182O15218 404 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 ST18O60284 1047 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 DARSP14868 501 aaKnown RBP17.44■□□□□ 0.38
COMMD6-209ENST00000477377 ATP2B1P20020 1258 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 EIF4BP23588 611 aaKnown RBP17.44■□□□□ 0.38
COMMD6-209ENST00000477377 TMOD1P28289 359 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 MCM7P33993 719 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 TXKP42681 527 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 GATMP50440 423 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
COMMD6-209ENST00000477377 ZNF174Q15697 407 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 FAM43BQ6ZT52 329 aaPredicted RBP17.44■□□□□ 0.38
COMMD6-209ENST00000477377 NPAS4Q8IUM7 802 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
COMMD6-209ENST00000477377 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 ADAM2Q99965 735 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 LMCD1Q9NZU5 365 aa17.44■□□□□ 0.38
COMMD6-209ENST00000477377 LYPLA2O95372 231 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 SPATA31C1P0DKV0 1188 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 FGFR4P22455 802 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 YWHABP31946 246 aaKnown RBP17.43■□□□□ 0.38
COMMD6-209ENST00000477377 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
COMMD6-209ENST00000477377 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 NBR1Q14596 966 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms