RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 JPH2Q9BR39 696 aaPredicted RBP16.81■□□□□ 0.28
DFFA-203ENST00000476658 PBX4Q9BYU1 374 aa16.81■□□□□ 0.28
DFFA-203ENST00000476658 RAB34Q9BZG1 259 aa16.81■□□□□ 0.28
DFFA-203ENST00000476658 TUFT1Q9NNX1 390 aa16.81■□□□□ 0.28
DFFA-203ENST00000476658 LRWD1Q9UFC0 647 aa16.81■□□□□ 0.28
DFFA-203ENST00000476658 MSRAQ9UJ68 235 aa16.81■□□□□ 0.28
DFFA-203ENST00000476658 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 STX6O43752 255 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 LYPLA2O95372 231 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 DNAJB2P25686 324 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 PBX2P40425 430 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 PRPHP41219 470 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 POLGP54098 1239 aaPredicted RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 NLRP11P59045 1033 aaKnown RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 DEFB103AP81534 67 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 PAK2Q13177 524 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 ZNF697Q5TEC3 545 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 HAUS3Q68CZ6 603 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 CATSPER3Q86XQ3 398 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 PHOSPHO2Q8TCD6 241 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 ZNF668Q96K58 619 aaPredicted RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 SCLT1Q96NL6 688 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 OSMRQ99650 979 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 AGO3Q9H9G7 860 aaKnown RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 CDHR5Q9HBB8 845 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 BMP2KQ9NSY1 1161 aaPredicted RBP16.8■□□□□ 0.28
DFFA-203ENST00000476658 MTMR6Q9Y217 621 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 PPME1Q9Y570 386 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 SQORQ9Y6N5 450 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
DFFA-203ENST00000476658 IGKV6-21A0A0C4DH24 114 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 GPR32O75388 356 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 MED24O75448 989 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 AMHP03971 560 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 SPATA31C1P0DKV0 1188 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 CCT6AP40227 531 aaKnown RBP16.79■□□□□ 0.28
DFFA-203ENST00000476658 RFC5P40937 340 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 CRYBB1P53674 252 aaPredicted RBP16.79■□□□□ 0.28
DFFA-203ENST00000476658 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
DFFA-203ENST00000476658 DRP2Q13474 957 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 PDIA5Q14554 519 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 RAB30Q15771 203 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.79■□□□□ 0.284e-6■□□□□ 8.6
DFFA-203ENST00000476658 Q7L0L9 218 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 TMCO2Q7Z6W1 182 aaPredicted RBP16.79■□□□□ 0.28
DFFA-203ENST00000476658 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 EXOC8Q8IYI6 725 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 TIFAQ96CG3 184 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 ZBED2Q9BTP6 218 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
DFFA-203ENST00000476658 A0A087WWV3 80 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 RPS6KA5O75582 802 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 RPA1P27694 616 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
DFFA-203ENST00000476658 RESTQ13127 1097 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
DFFA-203ENST00000476658 IL17AQ16552 155 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 FAM117BQ6P1L5 589 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 DEFB123Q8N688 67 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 SNX29Q8TEQ0 813 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 NLRP7Q8WX94 980 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 DHX33Q9H6R0 707 aaKnown RBP16.78■□□□□ 0.28
DFFA-203ENST00000476658 SUCLA2Q9P2R7 463 aaPredicted RBP16.78■□□□□ 0.28
DFFA-203ENST00000476658 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
DFFA-203ENST00000476658 PCDHA11Q9Y5I1 949 aa16.78■□□□□ 0.28
DFFA-203ENST00000476658 VWA3AA6NCI4 1184 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 BMP15O95972 392 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 MYOGP15173 224 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 GPC3P51654 580 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 EMC2Q15006 297 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
DFFA-203ENST00000476658 ODR4Q5SWX8 454 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 KRT79Q5XKE5 535 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 RHPN2Q8IUC4 686 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 NACC1Q96RE7 527 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 MTRQ99707 1265 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 NKX2-4Q9H2Z4 354 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 ADAMTS10Q9H324 1103 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
DFFA-203ENST00000476658 STK24Q9Y6E0 443 aa16.77■□□□□ 0.28
DFFA-203ENST00000476658 TTC3P53804 2025 aa16.76■□□□□ 0.27
DFFA-203ENST00000476658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
DFFA-203ENST00000476658 PP2D1A8MPX8 630 aa16.76■□□□□ 0.27
DFFA-203ENST00000476658 GPR182O15218 404 aa16.76■□□□□ 0.27
DFFA-203ENST00000476658 TLL1O43897 1013 aa16.76■□□□□ 0.27
DFFA-203ENST00000476658 UPP2O95045 317 aa16.76■□□□□ 0.27
DFFA-203ENST00000476658 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms