RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	CLCN3	P51790	818 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	FOSB	P53539	338 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	SKIV2L	Q15477	1246 aa	Known RBP	11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	AAK1	Q2M2I8	961 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	KIZ	Q2M2Z5	673 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	TCTN1	Q2MV58	587 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	B3GNT9	Q6UX72	402 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	BANK1	Q8NDB2	785 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	SP7	Q8TDD2	431 aa	Predicted RBP	11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	NLRP7	Q8WX94	980 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	PPM1E	Q8WY54	764 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	SYMPK	Q92797	1274 aa	Known RBP	11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	ZBTB10	Q96DT7	871 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	OSMR	Q99650	979 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	ZSWIM4	Q9H7M6	989 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	CERS4	Q9HA82	394 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	SUGCT	Q9HAC7	445 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	THEG	Q9P2T0	379 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	COL4A6	Q14031	1691 aa		11.45	□□□□□ -0.58
CCM2-208	ENST00000476594	HOXA2	O43364	376 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	VTN	P04004	478 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	RB1	P06400	928 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	SFPQ	P23246	707 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	RFC5	P40937	340 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	TRAPPC10	P48553	1259 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	POLG	P54098	1239 aa	Predicted RBP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	NLRP11	P59045	1033 aa	Known RBP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	BTG3	Q14201	252 aa	Predicted RBP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	ADGRE1	Q14246	886 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	UGCG	Q16739	394 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	TMEM266	Q2M3C6	531 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	ZNF410	Q86VK4	478 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	C4orf19	Q8IY42	314 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	LRRC71	Q8N4P6	559 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	FBXO18	Q8NFZ0	1043 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	TCP11	Q8WWU5	503 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	TNFRSF25	Q93038	417 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	GJA10	Q969M2	543 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	LXN	Q9BS40	222 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	AGO3	Q9H9G7	860 aa	Known RBP	11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	VAV3	Q9UKW4	847 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	MTUS1	Q9ULD2	1270 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	ST3GAL5	Q9UNP4	418 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	PCDHB7	Q9Y5E2	793 aa		11.44	□□□□□ -0.58
CCM2-208	ENST00000476594	CHD9	Q3L8U1	2897 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	MAF	O75444	373 aa	Predicted RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	EIF4B	P23588	611 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	SARS	P49591	514 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	GUCY1B3	Q02153	619 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	GRB10	Q13322	594 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	TARBP2	Q15633	366 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	SLC24A5	Q71RS6	500 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	CMTR2	Q8IYT2	770 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	ERMN	Q8TAM6	284 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	RSPH1	Q8WYR4	309 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	HAS1	Q92839	578 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	CEP170P1	Q96L14	293 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	PPP1R16B	Q96T49	567 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	KIF2C	Q99661	725 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	RAB34	Q9BZG1	259 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	TTC12	Q9H892	705 aa	Predicted RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	ERVK-5	Q9HDB9	667 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	CYP26B1	Q9NR63	512 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	DACT1	Q9NYF0	836 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	COG5	Q9UP83	839 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	NOC2L	Q9Y3T9	749 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	MTCH2	Q9Y6C9	303 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	STK24	Q9Y6E0	443 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	PTPRS	Q13332	1948 aa		11.43	□□□□□ -0.58
CCM2-208	ENST00000476594	SI	P14410	1827 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	EVPL	Q92817	2033 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	EML1	O00423	815 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	ASAP2	O43150	1006 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	GPR32	O75388	356 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	DGKI	O75912	1065 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	ATP2B1	P20020	1258 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	YWHAB	P31946	246 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	CTNNB1	P35222	781 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	TXK	P42681	527 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	GPC3	P51654	580 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	ST3GAL1	Q11201	340 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	CCDC85B	Q15834	202 aa	Predicted RBP	11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	EPC2	Q52LR7	807 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	TIGD5	Q53EQ6	642 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	NAALADL2	Q58DX5	795 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	EARS2	Q5JPH6	523 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	HAUS3	Q68CZ6	603 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	NOSTRIN	Q8IVI9	506 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	TMEM192	Q8IY95	271 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	ABI1	Q8IZP0	508 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	LINC01465	Q8N7H1	131 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	GDPD5	Q8WTR4	605 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	PSPC1	Q8WXF1	523 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	PPP2R3C	Q969Q6	453 aa		11.42	□□□□□ -0.58
CCM2-208	ENST00000476594	TBC1D32	Q96NH3	1257 aa		11.42	□□□□□ -0.58

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