RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 ENTPD7Q9NQZ7 604 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 DZANK1Q9NVP4 752 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 IRAK3Q9Y616 596 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 SQORQ9Y6N5 450 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 NRCAMQ92823 1304 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 LAMA4Q16363 1823 aa7.48□□□□□ -1.21
CLDN4-205ENST00000476494 B4DLN1 442 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 HRO43593 1189 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MGEA5O60502 916 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 FOXD2O60548 495 aaPredicted RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PAPLNO95428 1278 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 LGALS2P05162 132 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 SCG2P13521 617 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 GNAT2P19087 354 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 RFX1P22670 979 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MAGEA9P43362 315 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 NOVP48745 357 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MRPL12P52815 198 aaKnown RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 STXBP2Q15833 593 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 STPG1Q5TH74 334 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 RNF20Q5VTR2 975 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 C19orf48Q6RUI8 117 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 ZNF687Q8N1G0 1237 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 FAM227BQ96M60 508 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 SPATA33Q96N06 139 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MYADMQ96S97 322 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 IWS1Q96ST2 819 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MPHOSPH6Q99547 160 aaKnown RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 RPP25Q9BUL9 199 aaKnown RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 FTHL17Q9BXU8 183 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 LSG1Q9H089 658 aaKnown RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 MKNK2Q9HBH9 465 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PUF60Q9UHX1 559 aaKnown RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PADI3Q9ULW8 664 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
CLDN4-205ENST00000476494 PTPN13Q12923 2485 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 CCDC171Q6TFL3 1326 aa7.47□□□□□ -1.21
CLDN4-205ENST00000476494 APC2O95996 2303 aa7.46□□□□□ -1.21
CLDN4-205ENST00000476494 CFAP46Q8IYW2 2715 aa7.46□□□□□ -1.21
CLDN4-205ENST00000476494 A0A0D9SFI3 127 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 MBLAC1A4D2B0 266 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 FAM170BA6NMN3 283 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 TBKBP1A7MCY6 615 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 GSG1L2A8MUP6 293 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 PRDM1O75626 825 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 HSPA4P34932 840 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SLC16A2P36021 539 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 RPS9P46781 194 aaKnown RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 GPC5P78333 572 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 FOXC1Q12948 553 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 IKQ13123 557 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 HTR4Q13639 388 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 BECN1Q14457 450 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 NONOQ15233 471 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 RABEP1Q15276 862 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 COL28A1Q2UY09 1125 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 MARCH8Q5T0T0 291 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 KCNT2Q6UVM3 1135 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 C15orf39Q6ZRI6 1047 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SYTL5Q8TDW5 730 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 KCNB2Q92953 911 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 SHDQ96IW2 340 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 MYL10Q9BUA6 226 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 LTB4R2Q9NPC1 389 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 RNF19AQ9NV58 838 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 ARPP21Q9UBL0 812 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 CDY2AQ9Y6F7 541 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 CACNA1EQ15878 2313 aa7.46□□□□□ -1.22
CLDN4-205ENST00000476494 FRMPD2Q68DX3 1309 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-205ENST00000476494 URB1O60287 2271 aaKnown RBP7.45□□□□□ -1.22
CLDN4-205ENST00000476494 DOCK5Q9H7D0 1870 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 C9IYK1 514 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 CXCL14O95715 111 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 ZNF806P0C7X5 589 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 GNAT1P11488 350 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 PLA2G2AP14555 144 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 LAG3P18627 525 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 PBX3P40426 434 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 FAM189BP81408 668 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 MTAPQ13126 283 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
CLDN4-205ENST00000476494 KRT32Q14532 448 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 NECTIN1Q15223 517 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 TSGA10IPQ3SY00 556 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 TAF2Q6P1X5 1199 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
CLDN4-205ENST00000476494 NSUN6Q8TEA1 469 aaKnown RBP7.45□□□□□ -1.22
CLDN4-205ENST00000476494 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms