RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	TRIM43B	A6NCK2	446 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	ZBTB39	O15060	712 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	KIAA0355	O15063	1070 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	C22orf31	O95567	290 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	RPLP2	P05387	115 aa	Known RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	RAG1	P15918	1043 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	TXLNA	P40222	546 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	NPEPPS	P55786	919 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	BFSP2	Q13515	415 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	ZRSR1	Q15695	479 aa	Known RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	ECM1	Q16610	540 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	SPECC1	Q5M775	1068 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	HYI	Q5T013	277 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	PLA2G4F	Q68DD2	849 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	RSPH3	Q86UC2	560 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	EXOC8	Q8IYI6	725 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	RETREG2	Q8NC44	543 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	RASSF8	Q8NHQ8	419 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	CAGE1	Q8TC20	777 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	PIGO	Q8TEQ8	1089 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	CHAMP1	Q96JM3	812 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	CEP170P1	Q96L14	293 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	JPH2	Q9BR39	696 aa	Predicted RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	SH2D3A	Q9BRG2	576 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	NOC4L	Q9BVI4	516 aa	Known RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	CCSER1	Q9C0I3	900 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	HIPK3	Q9H422	1215 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	DBR1	Q9UK59	544 aa	Known RBP	11.18	□□□□□ -0.62
DMD-223	ENST00000475732	PCDHA7	Q9UN72	937 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	DNM3	Q9UQ16	869 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	PCDHA2	Q9Y5H9	948 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	LTBP2	Q14767	1821 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	SMIM35	A0A1B0GVV1	85 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	CAND2	O75155	1236 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	MAF	O75444	373 aa	Predicted RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	TIMP1	P01033	207 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	SYN1	P17600	705 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	TMOD1	P28289	359 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	RARRES1	P49788	294 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	POLG	P54098	1239 aa	Predicted RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	RBL2	Q08999	1139 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	GRB10	Q13322	594 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	EFCAB12	Q6NXP0	572 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	RUFY4	Q6ZNE9	571 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	METTL13	Q8N6R0	699 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	LEO1	Q8WVC0	666 aa	Predicted RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	SLC7A3	Q8WY07	619 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	DHX38	Q92620	1227 aa	Known RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	SYMPK	Q92797	1274 aa	Known RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	ZBTB10	Q96DT7	871 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	EPSTI1	Q96J88	318 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	CEP89	Q96ST8	783 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	PPP1R12C	Q9BZL4	782 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	CCDC39	Q9UFE4	941 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.17	□□□□□ -0.62
DMD-223	ENST00000475732	TANC1	Q9C0D5	1861 aa		11.17	□□□□□ -0.62
DMD-223	ENST00000475732		A0A087WWV3	80 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	IGKV6-21	A0A0C4DH24	114 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	ARHGEF35	A5YM69	484 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732		E9PMD0	336 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	DGAT1	O75907	488 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	EYA4	O95677	639 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	CKB	P12277	381 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	THPO	P40225	353 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	RFC5	P40937	340 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	DNM2	P50570	870 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	KARS	Q15046	597 aa	Known RBP	11.16	□□□□□ -0.62
DMD-223	ENST00000475732	TRIM71	Q2Q1W2	868 aa	Known RBP	11.16	□□□□□ -0.62
DMD-223	ENST00000475732	TMEM119	Q4V9L6	283 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	USP49	Q70CQ1	688 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	RPAIN	Q86UA6	219 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	NME8	Q8N427	588 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	DNAJB3	Q8WWF6	145 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	WNT8B	Q93098	351 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	PNMA5	Q96PV4	448 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	PLIN2	Q99541	437 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.16	□□□□□ -0.62
DMD-223	ENST00000475732	DHX33	Q9H6R0	707 aa	Known RBP	11.16	□□□□□ -0.62
DMD-223	ENST00000475732	SUGCT	Q9HAC7	445 aa		11.16	□□□□□ -0.62
DMD-223	ENST00000475732	UMODL1	Q5DID0	1318 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	SCN5A	Q14524	2016 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.15	□□□□□ -0.62
DMD-223	ENST00000475732		M0QZ92	97 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	GAS2	O43903	313 aa	Known RBP	11.15	□□□□□ -0.62
DMD-223	ENST00000475732	SELP	P16109	830 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	PLCG1	P19174	1290 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	ITGB8	P26012	769 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	CYP2C18	P33260	490 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	CLCN3	P51790	818 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	CCL23	P55773	120 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	EMC2	Q15006	297 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	ZNF618	Q5T7W0	954 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	ADAL	Q6DHV7	355 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	MFSD5	Q6N075	450 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	SHC4	Q6S5L8	630 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	KIAA0319L	Q8IZA0	1049 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	LRRC71	Q8N4P6	559 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	TMEM199	Q8N511	208 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms