RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	NTRK1	P04629	796 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	TPM3	P06753	285 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ZNF76	P36508	570 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	NKX3-2	P78367	333 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	CHAF1A	Q13111	956 aa	Predicted RBP	4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	CUL4A	Q13619	759 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	CCDC183	Q5T5S1	534 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	TSHZ3	Q63HK5	1081 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	MCTP2	Q6DN12	878 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ADAMTS13	Q76LX8	1427 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ZGPAT	Q8N5A5	531 aa	Known RBP	4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	SSH3	Q8TE77	659 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	GIPC2	Q8TF65	315 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	RAPGEF4	Q8WZA2	1011 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	SEC14L1	Q92503	715 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	PTPRU	Q92729	1446 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	EVI5L	Q96CN4	794 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	L2HGDH	Q9H9P8	463 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ECHDC1	Q9NTX5	307 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	PDRG1	Q9NUG6	133 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ATP10D	Q9P241	1426 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	TSC22D4	Q9Y3Q8	395 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	KIF3A	Q9Y496	699 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	TCAF1	Q9Y4C2	921 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	ITSN1	Q15811	1721 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	ADGRL3	Q9HAR2	1447 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	PNMA6E	A0A0J9YXQ4	647 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	SYCE3	A1L190	88 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	PI4KAP2	A4QPH2	592 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	MYO1B	O43795	1136 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	RRP9	O43818	475 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	MAP4K4	O95819	1239 aa	Predicted RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	KCNA6	P17658	529 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CAST	P20810	708 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	HSPA4	P34932	840 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	EIF4A1	P60842	406 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	UBE2H	P62256	183 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	TAGLN	Q01995	201 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	KRT32	Q14532	448 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CHRNA2	Q15822	529 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CWC27	Q6UX04	472 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	KSR2	Q6VAB6	950 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	AACS	Q86V21	672 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CIR1	Q86X95	450 aa	Predicted RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CPNE8	Q86YQ8	564 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	TTC5	Q8N0Z6	440 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	PI4KAP1	Q8N8J0	262 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	IL17RE	Q8NFR9	667 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	OR6P1	Q8NGX9	317 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	MAP7D2	Q96T17	732 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	FSD1	Q9BTV5	496 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	MRI	Q9BWK5	157 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	UPF3B	Q9BZI7	483 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	USP44	Q9H0E7	712 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	SEMA4A	Q9H3S1	761 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	CHPF2	Q9P2E5	772 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	PLA2G2D	Q9UNK4	145 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	PXDNL	A1KZ92	1463 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	MYO5B	Q9ULV0	1848 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	KNDC1	Q76NI1	1749 aa		4.92	□□□□□ -1.62
RBM39-229	ENST00000475651	RGS12	O14924	1447 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	RIMBP3C	A6NJZ7	1639 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	RIMBP3B	A6NNM3	1639 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	RIMBP3	Q9UFD9	1639 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	MAP2	P11137	1827 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	NOP56	O00567	594 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	SGSM2	O43147	1006 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	STX6	O43752	255 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	TERF1	P54274	439 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	KRT85	P78386	507 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	ZRSR1	Q15695	479 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	VPS53	Q5VIR6	699 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	IQCE	Q6IPM2	695 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	BLOC1S2	Q6QNY1	142 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	ARHGEF18	Q6ZSZ5	1173 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	MTERF4	Q7Z6M4	381 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	GAS2L3	Q86XJ1	694 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	RCC1L	Q96I51	464 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	JAKMIP1	Q96N16	626 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	CLIC6	Q96NY7	704 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	GORASP1	Q9BQQ3	440 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	TMEM168	Q9H0V1	697 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	BTG4	Q9NY30	223 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	MARCH2	Q9P0N8	246 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	ST6GALNAC2	Q9UJ37	374 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	COA3	Q9Y2R0	106 aa	Predicted RBP	4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	MAP3K2	Q9Y2U5	619 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	TSPOAP1	O95153	1857 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	RAD50	Q92878	1312 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	NRK	Q7Z2Y5	1582 aa		4.91	□□□□□ -1.62
RBM39-229	ENST00000475651	VPS37C	A5D8V6	355 aa	Predicted RBP	4.9	□□□□□ -1.63
RBM39-229	ENST00000475651		H3BQV1	296 aa		4.9	□□□□□ -1.63
RBM39-229	ENST00000475651	DDX3X	O00571	662 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
RBM39-229	ENST00000475651	RNMT	O43148	476 aa	Known RBP	4.9	□□□□□ -1.63
RBM39-229	ENST00000475651	OFD1	O75665	1012 aa		4.9	□□□□□ -1.63
RBM39-229	ENST00000475651	CCDC192	P0DO97	292 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms