RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PCYT2Q99447 389 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 SH2D3AQ9BRG2 576 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 ABHD16BQ9H3Z7 469 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 ATP6V0A4Q9HBG4 840 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 NRBP2Q9NSY0 501 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 INTS13Q9NVM9 706 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
TRAF4-210ENST00000475329 K7ENM7 598 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 CALUO43852 315 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 ATP4AP20648 1035 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 NMT1P30419 496 aaKnown RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 RGS2P41220 211 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 ARHGAP1Q07960 439 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 IRF5Q13568 498 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 EDRF1Q3B7T1 1238 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 HSDL1Q3SXM5 330 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 MTERF2Q49AM1 385 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 FAM102BQ5T8I3 360 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 LRRC55Q6ZSA7 311 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 SLC17A8Q8NDX2 589 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 USP6NLQ92738 828 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 KIFAP3Q92845 792 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 EMID1Q96A84 441 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 APBA2Q99767 749 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 NIFKQ9BYG3 293 aaKnown RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 TYW1Q9NV66 732 aaKnown RBP15.15■□□□□ 0.02
TRAF4-210ENST00000475329 TAB2Q9NYJ8 693 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 PPME1Q9Y570 386 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
TRAF4-210ENST00000475329 LRRC10BA6NIK2 292 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 PDXKO00764 312 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 N4BP3O15049 544 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.012e-7■■□□□ 11.4
TRAF4-210ENST00000475329 RFC5P40937 340 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ADCYAP1R1P41586 468 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 SLC26A2P50443 739 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 GSDMDP57764 484 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 FKBP3Q00688 224 aaKnown RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 NR1I3Q14994 352 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 EMC2Q15006 297 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 PLPPR4Q7Z2D5 763 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 CREBRFQ8IUR6 639 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ZC3H3Q8IXZ2 948 aaKnown RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 GLG1Q92896 1179 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 C17orf75Q9HAS0 396 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 NRBP1Q9UHY1 535 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-210ENST00000475329 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 CEP350Q5VT06 3117 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 KAT6AQ92794 2004 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 THSD7BQ9C0I4 1608 aa15.14■□□□□ 0.01
TRAF4-210ENST00000475329 ZMYM2Q9UBW7 1377 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 AOC2O75106 756 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 PPP1R37O75864 691 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 PTGS1P23219 599 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 HOXD13P35453 343 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 FCGRTP55899 365 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 RTP1P59025 263 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 DMP1Q13316 513 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-210ENST00000475329 CCDC144BQ3MJ40 725 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 ZC2HC1CQ53FD0 456 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-210ENST00000475329 TMEM63BQ5T3F8 832 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 OLFML2BQ68BL8 750 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 IQSEC1Q6DN90 963 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-210ENST00000475329 VPS16Q9H269 839 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 ST6GALNAC4Q9H4F1 302 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 SMARCAD1Q9H4L7 1026 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 GPRC5CQ9NQ84 441 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 PDLIM7Q9NR12 457 aa15.13■□□□□ 0.01
TRAF4-210ENST00000475329 LGALS16A8MUM7 142 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 GNA14O95837 355 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-210ENST00000475329 CYP2B6P20813 491 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 SMTNP53814 917 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 NCKAP1LP55160 1127 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 PEX3P56589 373 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 DUSP28Q4G0W2 176 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 GJC2Q5T442 439 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-210ENST00000475329 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 TRIM50Q86XT4 487 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 CCDC150Q8NCX0 1101 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms