RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 OSBPL1AQ9BXW6 950 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 A0A0A6YYK5 440 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 SUN1O94901 812 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 H2AFZP0C0S5 128 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 LACTBP83111 547 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 ATP11AP98196 1134 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 LRRC14Q15048 493 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 CALCRLQ16602 461 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 CCDC38Q502W7 563 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 H2AFVQ71UI9 128 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 MAEAQ7L5Y9 396 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 KCNV2Q8TDN2 545 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 SNX29Q8TEQ0 813 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 NAF1Q96HR8 494 aaKnown RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 IFT74Q96LB3 600 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 FESP07332 822 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 GOLGA8HP0CJ92 632 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 FXR2P51116 673 aaKnown RBP eCLIP20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 TNFAIP8L3Q5GJ75 292 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 FITM2Q8N6M3 262 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 CRNKL1Q9BZJ0 848 aaKnown RBP20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 AMFRQ9UKV5 643 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 TCP11X1B4DZS4 312 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 KIAA1755Q5JYT7 1200 aa20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 CNOT7Q9UIV1 285 aaKnown RBP20.16■□□□□ 0.82
ECHDC1-214ENST00000474289 KIAA0391O15091 583 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 ATP4AP20648 1035 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 PRKCIP41743 596 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 PLS1Q14651 629 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 JAMLQ86YT9 394 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 DYDC1Q8WWB3 177 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 OSGEPQ9NPF4 335 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 DBR1Q9UK59 544 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 SLC37A4O43826 429 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 AHCYL1O43865 530 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 FGFR4P22455 802 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 AUHQ13825 339 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 ECM1Q16610 540 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 TMEM119Q4V9L6 283 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 MGARPQ8TDB4 240 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 LRRC27Q9C0I9 530 aa20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 BIN2Q9UBW5 565 aaPredicted RBP20.15■□□□□ 0.82
ECHDC1-214ENST00000474289 PALM3A6NDB9 673 aaPredicted RBP20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 DDX3YO15523 660 aaKnown RBP20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 ADAMTS2O95450 1211 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 GJB6O95452 261 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 GNA11P29992 359 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 NPEPPSP55786 919 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 ADAM9Q13443 819 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 SBK1Q52WX2 424 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 TAOK1Q7L7X3 1001 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 TMEM109Q9BVC6 243 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 RXFP1Q9HBX9 757 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 GRHL1Q9NZI5 618 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 PPP1R9AQ9ULJ8 1098 aa20.14■□□□□ 0.82
ECHDC1-214ENST00000474289 FAM187AA6NFU0 413 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 RAB27AP51159 221 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 MAPK7Q13164 816 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 KRT79Q5XKE5 535 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 NUGGCQ68CJ6 796 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 TRIM68Q6AZZ1 485 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 BTNL9Q6UXG8 535 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 CROCCP2Q86T23 111 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 EXOC3L1Q86VI1 746 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 STMN4Q9H169 189 aaPredicted RBP20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 KCTD10Q9H3F6 313 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 ATP8B3O60423 1300 aa20.14■□□□□ 0.81
ECHDC1-214ENST00000474289 DPPA5A6NC42 116 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 O00370 1275 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 DDX3XO00571 662 aaKnown RBP eCLIP20.13■□□□□ 0.817e-10■■■□□ 16
ECHDC1-214ENST00000474289 RASGRF2O14827 1237 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 NTSR2O95665 410 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 DRG2P55039 364 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 MECOMQ03112 1051 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 ORC2Q13416 577 aaPredicted RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 PPP2R5EQ16537 467 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 SLC30A9Q6PML9 568 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 MCM9Q9NXL9 1143 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 CPSF2Q9P2I0 782 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 HDAC9Q9UKV0 1011 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 ARL2BPQ9Y2Y0 163 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 KLRF2D3W0D1 207 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms