RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 C17orf80Q9BSJ5 609 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
CKS1B-206ENST00000474215 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
CKS1B-206ENST00000474215 ERVK-5Q9HDB9 667 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 SEPT9Q9UHD8 586 aaPredicted RBP12.57□□□□□ -0.4
CKS1B-206ENST00000474215 AKT3Q9Y243 479 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 GPR182O15218 404 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 LPXNO60711 386 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 DKC1O60832 514 aaKnown RBP eCLIP12.56□□□□□ -0.4
CKS1B-206ENST00000474215 P4HBP07237 508 aaKnown RBP12.56□□□□□ -0.4
CKS1B-206ENST00000474215 NLRP11P59045 1033 aaKnown RBP12.56□□□□□ -0.4
CKS1B-206ENST00000474215 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
CKS1B-206ENST00000474215 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 EPHA7Q15375 998 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 ANO5Q75V66 913 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 MICALL1Q8N3F8 863 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 SAMD11Q96NU1 681 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 PPP1R16BQ96T49 567 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 OSMRQ99650 979 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 ADAMTS10Q9H324 1103 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 LMCD1Q9NZU5 365 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 ST3GAL5Q9UNP4 418 aa12.56□□□□□ -0.4
CKS1B-206ENST00000474215 MICAL3Q7RTP6 2002 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 DLL1O00548 723 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 ST18O60284 1047 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 DGKIO75912 1065 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 STAG3L1P0CL83 205 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 EIF4BP23588 611 aaKnown RBP12.55□□□□□ -0.4
CKS1B-206ENST00000474215 DNM2P50570 870 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 CDC42EP1Q00587 391 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 CALCRLQ16602 461 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 EPC2Q52LR7 807 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 TMEM192Q8IY95 271 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 FIBCD1Q8N539 461 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 GDPD5Q8WTR4 605 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 ZNF689Q96CS4 500 aaPredicted RBP12.55□□□□□ -0.4
CKS1B-206ENST00000474215 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 SH2D3AQ9BRG2 576 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 SIP14410 1827 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 REV3LO60673 3130 aa12.55□□□□□ -0.4
CKS1B-206ENST00000474215 IGKV6-21A0A0C4DH24 114 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 DENND3A2RUS2 1198 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 MGEA5O60502 916 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 NEMFO60524 1076 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 MAFO75444 373 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 FAM228AQ86W67 206 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 C4orf19Q8IY42 314 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 ADAM2Q99965 735 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 ZSWIM4Q9H7M6 989 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 RC3H2Q9HBD1 1191 aaKnown RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 CYP26B1Q9NR63 512 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 C1orf112Q9NSG2 853 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 ADGRA3Q8IWK6 1321 aa12.54□□□□□ -0.4
CKS1B-206ENST00000474215 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
CKS1B-206ENST00000474215 H3BNC9 293 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 WNT7AO00755 349 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 SLITRK3O94933 977 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 DARSP14868 501 aaKnown RBP12.53□□□□□ -0.4
CKS1B-206ENST00000474215 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 BMPR1AP36894 532 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 TXKP42681 527 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 SARSP49591 514 aaKnown RBP12.53□□□□□ -0.4
CKS1B-206ENST00000474215 GPC3P51654 580 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 NPEPPSP55786 919 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 FAM189BP81408 668 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 DRP2Q13474 957 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 OTUD6AQ7L8S5 288 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 EXOC8Q8IYI6 725 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
CKS1B-206ENST00000474215 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 DYDC2Q96IM9 177 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 ZNF668Q96K58 619 aaPredicted RBP12.53□□□□□ -0.4
CKS1B-206ENST00000474215 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms