RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 DENND3A2RUS2 1198 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 DDX11L8A8MPP1 907 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 SLC37A4O43826 429 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 ZNF862O60290 1169 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 ARHGEF15O94989 841 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 PTPROQ16827 1216 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 LARP1BQ659C4 914 aaKnown RBP20.9■□□□□ 0.94
CCDC171-206ENST00000474193 DIS3L2Q8IYB7 885 aaKnown RBP20.9■□□□□ 0.94
CCDC171-206ENST00000474193 EXOC8Q8IYI6 725 aa20.9■□□□□ 0.94
CCDC171-206ENST00000474193 ATXN2LQ8WWM7 1075 aaKnown RBP20.9■□□□□ 0.94
CCDC171-206ENST00000474193 VTNP04004 478 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 P4HBP07237 508 aaKnown RBP20.89■□□□□ 0.93
CCDC171-206ENST00000474193 QARSP47897 775 aaKnown RBP20.89■□□□□ 0.93
CCDC171-206ENST00000474193 CLCN3P51790 818 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 GUCY1B3Q02153 619 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 NR5A1Q13285 461 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 PPP2R5CQ13362 524 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 BTG3Q14201 252 aaPredicted RBP20.89■□□□□ 0.93
CCDC171-206ENST00000474193 AAK1Q2M2I8 961 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 KIZQ2M2Z5 673 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 MTERF2Q49AM1 385 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 NPAS4Q8IUM7 802 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 NIFKQ9BYG3 293 aaKnown RBP20.89■□□□□ 0.93
CCDC171-206ENST00000474193 KCNMB3Q9NPA1 279 aa20.89■□□□□ 0.93
CCDC171-206ENST00000474193 EPOPA6NHQ4 379 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 NLRP11P59045 1033 aaKnown RBP20.88■□□□□ 0.93
CCDC171-206ENST00000474193 MRPS5P82675 430 aaKnown RBP20.88■□□□□ 0.93
CCDC171-206ENST00000474193 TMEM266Q2M3C6 531 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 B3GNT9Q6UX72 402 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 TMEM192Q8IY95 271 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 PPP1R16BQ96T49 567 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 OSMRQ99650 979 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 C17orf80Q9BSJ5 609 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 C1orf112Q9NSG2 853 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 ST3GAL5Q9UNP4 418 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 NOC2LQ9Y3T9 749 aaKnown RBP20.88■□□□□ 0.93
CCDC171-206ENST00000474193 PCDHB7Q9Y5E2 793 aa20.88■□□□□ 0.93
CCDC171-206ENST00000474193 BTBD18B2RXH4 712 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 RB1P06400 928 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 ZSCAN20P17040 1043 aaPredicted RBP20.87■□□□□ 0.93
CCDC171-206ENST00000474193 EPHA7Q15375 998 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 UGCGQ16739 394 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 EPC2Q52LR7 807 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 TJAP1Q5JTD0 557 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 OTUD6AQ7L8S5 288 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 LRRC71Q8N4P6 559 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 BANK1Q8NDB2 785 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 GDPD5Q8WTR4 605 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 CDHR5Q9HBB8 845 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 PCDHA12Q9UN75 941 aa20.87■□□□□ 0.93
CCDC171-206ENST00000474193 CHD9Q3L8U1 2897 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 IBSPP21815 317 aaPredicted RBP20.86■□□□□ 0.93
CCDC171-206ENST00000474193 GPM6BQ13491 265 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 NCAPH2Q6IBW4 605 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 RTN4RL1Q86UN2 441 aaPredicted RBP20.86■□□□□ 0.93
CCDC171-206ENST00000474193 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 NLRP7Q8WX94 980 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 ADAM2Q99965 735 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 ERVK-5Q9HDB9 667 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 COG5Q9UP83 839 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 PPME1Q9Y570 386 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 WDR81Q562E7 1941 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 LOXHD1Q8IVV2 1947 aa20.86■□□□□ 0.93
CCDC171-206ENST00000474193 TTC3P53804 2025 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 ADGRA3Q8IWK6 1321 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 GPR32O75388 356 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 DGKIO75912 1065 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 PDIA4P13667 645 aaKnown RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 EIF4BP23588 611 aaKnown RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 SARSP49591 514 aaKnown RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 TARBP2Q15633 366 aaKnown RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 CALCRLQ16602 461 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 MCTP1Q6DN14 999 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 SLC24A5Q71RS6 500 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 SPRED2Q7Z698 418 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 INO80BQ9C086 356 aaPredicted RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 SIP14410 1827 aa20.85■□□□□ 0.93
CCDC171-206ENST00000474193 PRRC2BQ5JSZ5 2229 aaKnown RBP20.85■□□□□ 0.93
CCDC171-206ENST00000474193 H3BNC9 293 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 EML1O00423 815 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 NEMFO60524 1076 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 LPXNO60711 386 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 CTNNB1P35222 781 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
CCDC171-206ENST00000474193 CMTR2Q8IYT2 770 aaKnown RBP20.84■□□□□ 0.93
CCDC171-206ENST00000474193 SLC7A3Q8WY07 619 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 HAS1Q92839 578 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 TNFRSF25Q93038 417 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 C11orf84Q9BUA3 381 aaPredicted RBP20.84■□□□□ 0.93
CCDC171-206ENST00000474193 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
CCDC171-206ENST00000474193 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
CCDC171-206ENST00000474193 ZSWIM4Q9H7M6 989 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 RGS18Q9NS28 235 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
CCDC171-206ENST00000474193 CDH23Q9H251 3354 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 VPS37CA5D8V6 355 aaPredicted RBP20.83■□□□□ 0.93
CCDC171-206ENST00000474193 MAFO75444 373 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms