RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 SH2D3AQ9BRG2 576 aa22.41■■□□□ 1.18
TMEM54-204ENST00000474144 H3BNC9 293 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 CCNT1O60563 726 aaKnown RBP22.4■■□□□ 1.18
TMEM54-204ENST00000474144 CRYBB1P53674 252 aaPredicted RBP22.4■■□□□ 1.18
TMEM54-204ENST00000474144 GPM6BQ13491 265 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 C8orf34Q49A92 452 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 PPP4R3AQ6IN85 833 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 FAM228AQ86W67 206 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 BANK1Q8NDB2 785 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 TNFRSF25Q93038 417 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 KCNMB3Q9NPA1 279 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 SEPT9Q9UHD8 586 aaPredicted RBP22.4■■□□□ 1.18
TMEM54-204ENST00000474144 VAV3Q9UKW4 847 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 AKT3Q9Y243 479 aa22.4■■□□□ 1.18
TMEM54-204ENST00000474144 KRT2P35908 639 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 GATMP50440 423 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 KCNQ1P51787 676 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 BTG3Q14201 252 aaPredicted RBP22.39■■□□□ 1.17
TMEM54-204ENST00000474144 TARBP2Q15633 366 aaKnown RBP22.39■■□□□ 1.17
TMEM54-204ENST00000474144 MTERF2Q49AM1 385 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 NPAS4Q8IUM7 802 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 HAS1Q92839 578 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 CEP89Q96ST8 783 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 ADAMTS10Q9H324 1103 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 MUC3AQ02505 3323 aa22.39■■□□□ 1.17
TMEM54-204ENST00000474144 CTNNB1P35222 781 aa22.38■■□□□ 1.17
TMEM54-204ENST00000474144 NLRP11P59045 1033 aaKnown RBP22.38■■□□□ 1.17
TMEM54-204ENST00000474144 DRP2Q13474 957 aa22.38■■□□□ 1.17
TMEM54-204ENST00000474144 POTEDQ86YR6 584 aa22.38■■□□□ 1.17
TMEM54-204ENST00000474144 ADAM2Q99965 735 aa22.38■■□□□ 1.17
TMEM54-204ENST00000474144 NIFKQ9BYG3 293 aaKnown RBP22.38■■□□□ 1.17
TMEM54-204ENST00000474144 KIAA1671Q9BY89 1806 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 GPR182O15218 404 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 GCFC2P16383 781 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 TMOD1P28289 359 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 TBC1D8BQ0IIM8 1120 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 PPP2R5CQ13362 524 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 PAN2Q504Q3 1202 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 XKR3Q5GH77 459 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 CLP1Q92989 425 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 MRPL38Q96DV4 380 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 FAM20AQ96MK3 541 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 MAP7D2Q96T17 732 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 KIF2CQ99661 725 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 RGS18Q9NS28 235 aa22.37■■□□□ 1.17
TMEM54-204ENST00000474144 MRPL42Q9Y6G3 142 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 TCF20Q9UGU0 1960 aaKnown RBP22.37■■□□□ 1.17
TMEM54-204ENST00000474144 ATG2AQ2TAZ0 1938 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 DDX11L8A8MPP1 907 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 BTBD18B2RXH4 712 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 C5orf67F2Z3F1 127 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 MMP1P03956 469 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 STAG3L1P0CL83 205 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 BMP1P13497 986 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 BMPR1AP36894 532 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 SARSP49591 514 aaKnown RBP22.36■■□□□ 1.17
TMEM54-204ENST00000474144 GPC3P51654 580 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 ADAMTS19Q8TE59 1207 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 HLA-CQ95604 372 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 WRAP73Q9P2S5 460 aaPredicted RBP22.36■■□□□ 1.17
TMEM54-204ENST00000474144 LRFN2Q9ULH4 789 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 COG5Q9UP83 839 aa22.36■■□□□ 1.17
TMEM54-204ENST00000474144 DENND3A2RUS2 1198 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 WNT7AO00755 349 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 PSMC5P62195 406 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 PTPROQ16827 1216 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 ODR4Q5SWX8 454 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 PLA2G4FQ68DD2 849 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 ANO5Q75V66 913 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 CCDC83Q8IWF9 413 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 CMTR2Q8IYT2 770 aaKnown RBP22.35■■□□□ 1.17
TMEM54-204ENST00000474144 BRMS1Q9HCU9 246 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 LIMCH1Q9UPQ0 1083 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 PCDHB7Q9Y5E2 793 aa22.35■■□□□ 1.17
TMEM54-204ENST00000474144 C9IYK1 514 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 TBX3O15119 743 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 GRM6O15303 877 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 MARCH6O60337 910 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 FGFR4P22455 802 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 DSC3Q14574 896 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 SLC24A5Q71RS6 500 aa22.34■■□□□ 1.17
TMEM54-204ENST00000474144 DIS3L2Q8IYB7 885 aaKnown RBP22.34■■□□□ 1.17
TMEM54-204ENST00000474144 NECAB3Q96P71 396 aaPredicted RBP22.34■■□□□ 1.17
TMEM54-204ENST00000474144 NAP1L4Q99733 375 aaKnown RBP22.34■■□□□ 1.17
TMEM54-204ENST00000474144 IGKV6-21A0A0C4DH24 114 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 RB1P06400 928 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 EIF4BP23588 611 aaKnown RBP22.33■■□□□ 1.17
TMEM54-204ENST00000474144 QARSP47897 775 aaKnown RBP22.33■■□□□ 1.17
TMEM54-204ENST00000474144 GUCY1B3Q02153 619 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 SPIRE1Q08AE8 756 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 AAK1Q2M2I8 961 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 FAM102BQ5T8I3 360 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 NCAPH2Q6IBW4 605 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 ZNF579Q8NAF0 562 aaKnown RBP22.33■■□□□ 1.17
TMEM54-204ENST00000474144 IL27Q8NEV9 243 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 C1orf112Q9NSG2 853 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 RWDD3Q9Y3V2 267 aa22.33■■□□□ 1.17
TMEM54-204ENST00000474144 FNDC1Q4ZHG4 1894 aaPredicted RBP22.32■■□□□ 1.16
TMEM54-204ENST00000474144 CSDE1O75534 798 aaKnown RBP22.32■■□□□ 1.16
TMEM54-204ENST00000474144 CSPG5O95196 566 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms