RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 WRAP73Q9P2S5 460 aaPredicted RBP11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 H3BRB1 525 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 K7ENM7 598 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 ZNF862O60290 1169 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 GCNT3O95395 438 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 FGFR1OPO95684 399 aaKnown RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 TPM2P07951 284 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 TMOD1P28289 359 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 ERCC5P28715 1186 aaPredicted RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 NPEPPSP55786 919 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 CACNB2Q08289 660 aaPredicted RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 ALCAMQ13740 583 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 GIT2Q14161 759 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 ZNF484Q5JVG2 852 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 C11orf57Q6ZUT1 292 aaPredicted RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 ANO5Q75V66 913 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 RNF180Q86T96 592 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 SFR1Q86XK3 245 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 MYOCDQ8IZQ8 938 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 FUCA2Q9BTY2 467 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 C17orf75Q9HAS0 396 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 TBC1D7Q9P0N9 293 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 GNEQ9Y223 722 aaKnown RBP11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 COL1A2P08123 1366 aa11.36□□□□□ -0.59
PRPF38A-202ENST00000474048 A6NJR5 290 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 ZBTB39O15060 712 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 MAGEB2O15479 319 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 INHAP05111 366 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 GNAT1P11488 350 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 IGBP1P78318 339 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 PLCB4Q15147 1175 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 GNASQ5JWF2 1037 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 SYCP3Q8IZU3 236 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 METTL13Q8N6R0 699 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 PCSK9Q8NBP7 692 aaKnown RBP11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 NELFBQ8WX92 580 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 DNAJC19Q96DA6 116 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 DHTKD1Q96HY7 919 aaPredicted RBP11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 SCLT1Q96NL6 688 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 SH2D3AQ9BRG2 576 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 NIFKQ9BYG3 293 aaKnown RBP11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 MAGEC2Q9UBF1 373 aaPredicted RBP11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 PCDHB13Q9Y5F0 798 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 PTCH2Q9Y6C5 1203 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 KAT6AQ92794 2004 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 UBE4BO95155 1302 aa11.35□□□□□ -0.59
PRPF38A-202ENST00000474048 TMEM150BA6NC51 233 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 RRN3P2A6NIE6 340 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 KLRC4O43908 158 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 TPM3P06753 285 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 PLS3P13797 630 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 SCP2P22307 547 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 TFDP1Q14186 410 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 MFSD10Q14728 455 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 C7orf31Q8N865 590 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 DEPTORQ8TB45 409 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 PSPC1Q8WXF1 523 aaKnown RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 PCYT2Q99447 389 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 POLR3FQ9H1D9 316 aaPredicted RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 SUGCTQ9HAC7 445 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 KMT5AQ9NQR1 393 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 RWDD2AQ9UIY3 292 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
PRPF38A-202ENST00000474048 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 LRRIQ4A6NIV6 560 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 SFI1A8K8P3 1242 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 RSPH10B2B2RC85 870 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 IKBKBO14920 756 aa11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 EIF3DO15371 548 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRPF38A-202ENST00000474048 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms