RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 WRAP73Q9P2S5 460 aaPredicted RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 VWA3AA6NCI4 1184 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 MAFO75444 373 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 MED24O75448 989 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 NLRP11P59045 1033 aaKnown RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 PAK2Q13177 524 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 KIZQ2M2Z5 673 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 FOXD4L5Q5VV16 416 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 IGSF22Q8N9C0 903 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 PHOSPHO2Q8TCD6 241 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 NLRP7Q8WX94 980 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 FOXD4L4Q8WXT5 416 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 MTRQ99707 1265 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 CXXC1Q9P0U4 656 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
USF1-205ENST00000473969 MSRAQ9UJ68 235 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
USF1-205ENST00000473969 ARHGEF35A5YM69 484 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 ZBTB39O15060 712 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 GPR182O15218 404 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 RPS6KA5O75582 802 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 AMHP03971 560 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 CEBPZQ03701 1054 aaKnown RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 NFX1Q12986 1120 aaKnown RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 LPIN1Q14693 890 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 ZRSR1Q15695 479 aaKnown RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 FAM43BQ6ZT52 329 aaPredicted RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 RHPN2Q8IUC4 686 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 VWCEQ96DN2 955 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 AK8Q96MA6 479 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 ZBED2Q9BTP6 218 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 FTHL17Q9BXU8 183 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 ATP6V0A4Q9HBG4 840 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
USF1-205ENST00000473969 KIAA1024Q9UPX6 916 aa15.33■□□□□ 0.04
USF1-205ENST00000473969 TANC1Q9C0D5 1861 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 IGKV6-21A0A0C4DH24 114 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 DGAT1O75907 488 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 CD52P31358 61 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 FXR1P51114 621 aaKnown RBP eCLIP15.32■□□□□ 0.04
USF1-205ENST00000473969 WDR5P61964 334 aaKnown RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 EMC2Q15006 297 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 RAB30Q15771 203 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 POTEGQ6S5H5 508 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 LINC01465Q8N7H1 131 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 OSMRQ99650 979 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
USF1-205ENST00000473969 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 TRIOBPQ9H2D6 2365 aa15.32■□□□□ 0.04
USF1-205ENST00000473969 SOX1O00570 391 aaPredicted RBP15.31■□□□□ 0.04
USF1-205ENST00000473969 ASAP2O43150 1006 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
USF1-205ENST00000473969 GPR32O75388 356 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 LONP1P36776 959 aaKnown RBP15.31■□□□□ 0.04
USF1-205ENST00000473969 UBA7P41226 1012 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 RARRES1P49788 294 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 GPC3P51654 580 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 STK38Q15208 465 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 IL17AQ16552 155 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 FAM173BQ6P4H8 233 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 ZNF410Q86VK4 478 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
USF1-205ENST00000473969 TMEM143Q96AN5 459 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
USF1-205ENST00000473969 PADI3Q9ULW8 664 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
USF1-205ENST00000473969 A0A087WWV3 80 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 GRXCR1A8MXD5 290 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 F13A1P00488 732 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 CDC25AP30304 524 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 DRP2Q13474 957 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 TFDP1Q14186 410 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 MXD4Q14582 209 aaPredicted RBP15.3■□□□□ 0.04
USF1-205ENST00000473969 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 CABP7Q86V35 215 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 KCTD17Q8N5Z5 321 aa15.3■□□□□ 0.04
USF1-205ENST00000473969 MCPH1Q8NEM0 835 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms