RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	STIL	Q15468	1287 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	MAPRE2	Q15555	327 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZNF423	Q2M1K9	1284 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	TNNI3K	Q59H18	835 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ARMC4	Q5T2S8	1044 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	C1orf228	Q6PIY5	440 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZBED8	Q8IZ13	594 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ALDH16A1	Q8IZ83	802 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	BBOF1	Q8ND07	529 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	EXD1	Q8NHP7	514 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	FANCE	Q9HB96	536 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	TNN	Q9UQP3	1299 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ABCA6	Q8N139	1617 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	ITSN2	Q9NZM3	1697 aa		13.64	□□□□□ -0.23
HCLS1-205	ENST00000473883	NPM3	O75607	178 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	DDHD2	O94830	711 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CYP1A1	P04798	512 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	IDE	P14735	1019 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZKSCAN1	P17029	563 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	SERPINB3	P29508	390 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GNA11	P29992	359 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PLTP	P55058	493 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CD83	Q01151	205 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PRKCE	Q02156	737 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	EXOSC9	Q06265	439 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	KPNB1	Q14974	876 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GSTA3	Q16772	222 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	SLC30A10	Q6XR72	485 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ANKRD53	Q8N9V6	530 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PTCD2	Q8WV60	388 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GAB3	Q8WWW8	586 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	RUBCN	Q92622	972 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	C8orf37	Q96NL8	207 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	FOXP3	Q9BZS1	431 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	FARSB	Q9NSD9	589 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GID8	Q9NWU2	228 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CD2AP	Q9Y5K6	639 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GCC2	Q8IWJ2	1684 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CDC42BPB	Q9Y5S2	1711 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TBXAS1	P24557	533 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ITGA9	Q13797	1035 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	R3HDM1	Q15032	1099 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	EZH2	Q15910	746 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CFAP70	Q5T0N1	1121 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	KLHL35	Q6PF15	583 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	NUP93	Q8N1F7	819 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	MDM1	Q8TC05	714 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	AEN	Q8WTP8	325 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	NRBF2	Q96F24	287 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GMIP	Q9P107	970 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TRAF3IP3	Q9Y228	551 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TDRKH	Q9Y2W6	561 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	STRC	Q7RTU9	1775 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GOLGA8J	A6NMD2	632 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PRSS47	A8MTI9	375 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	GOLGA8M	H3BSY2	632 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TRAPPC3	O43617	180 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	FYN	P06241	537 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PABPC4L	P0CB38	370 aa	Known RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	IFNA8	P32881	189 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ATP1A2	P50993	1020 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TCIRG1	Q13488	830 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	KRT71	Q3SY84	523 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	KIAA1614	Q5VZ46	1190 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PDXDC2P	Q6P474	469 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	MAEA	Q7L5Y9	396 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ARFGAP2	Q8N6H7	521 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	ARL8A	Q96BM9	186 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	SPACA7	Q96KW9	195 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	PLEKHA5	Q9HAU0	1116 aa		13.63	□□□□□ -0.23
HCLS1-205	ENST00000473883	TRAV6	A0A075B6T7	132 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	HDAC3	O15379	428 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	GUCY1B2	O75343	617 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	CDK18	Q07002	472 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	NNT	Q13423	1086 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	NONO	Q15233	471 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	TRAPPC3L	Q5T215	181 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	FCRLB	Q6BAA4	426 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	NLRP3	Q96P20	1036 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	DHRS9	Q9BPW9	319 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	ALG1	Q9BT22	464 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	BCL2L13	Q9BXK5	485 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	CALN1	Q9BXU9	219 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	TCEAL9	Q9UHQ7	104 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	MRPL11	Q9Y3B7	192 aa	Known RBP	13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	EXTL3	O43909	919 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	OR5F1	O95221	314 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	FOS	P01100	380 aa	Predicted RBP	13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	SFTPC	P11686	197 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	NR1D1	P20393	614 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	PFKP	Q01813	784 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	RALGDS	Q12967	914 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	KLHL38	Q2WGJ6	581 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	BTBD8	Q5XKL5	378 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms