RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 VCX3BQ9H321 246 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 GOLPH3LQ9H4A5 285 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 VCX3AQ9NNX9 186 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 BAIAP2L1Q9UHR4 511 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNRF3Q9ULT6 936 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RRP7AQ9Y3A4 280 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 DAAM1Q9Y4D1 1078 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PHRF1Q9P1Y6 1649 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 A0A1B0GVL5 298 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 CTAGE9A4FU28 777 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 VPS37CA5D8V6 355 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 LINC01387J3KSC0 135 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 N4BP3O15049 544 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 SMAD7O15105 426 aaKnown RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TPPPO94811 219 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 GSTA1P08263 222 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 ALADP13716 330 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 SELPP16109 830 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TRIM21P19474 475 aaKnown RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 CCND1P24385 295 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 USP14P54578 494 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 HDAC4P56524 1084 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 SRSF11Q05519 484 aaKnown RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 C19orf57Q0VDD7 668 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 ALS2CLQ60I27 953 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 GALNT17Q6IS24 598 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 Q6ZUG5 572 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 OTUD6AQ7L8S5 288 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 NLRP14Q86W24 1093 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TMEM139Q8IV31 216 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 KLHDC4Q8TBB5 520 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 MYCBPAPQ8TBZ2 947 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 RSPH1Q8WYR4 309 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 FERD3LQ96RJ6 166 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 CCT8L2Q96SF2 557 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 NRDE2Q9H7Z3 1164 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 DPPA5A6NC42 116 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 GOLGA8AA7E2F4 631 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TIMM44O43615 452 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 FLOT1O75955 427 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TROVE2P10155 538 aaKnown RBP eCLIP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 APBA1Q02410 837 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 PDCLQ13371 301 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TNNI3KQ59H18 835 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TXNDC11Q6PKC3 985 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 NCCRP1Q6ZVX7 275 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 MAATS1Q7Z4T9 603 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 LRRC43Q8N309 656 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 SLC7A3Q8WY07 619 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 ACDQ96AP0 544 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF653Q96CK0 615 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 TRIM55Q9BYV6 548 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 PREBQ9HCU5 417 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 ATRNO75882 1429 aa5.63□□□□□ -1.51
TMEM39A-206ENST00000473684 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 GSTA2P09210 222 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 IFIT2P09913 472 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ALOX15P16050 662 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 KIF5AQ12840 1032 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ARHGEF25Q86VW2 580 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD44Q8N8A2 993 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 RBBP8NLQ8NC74 664 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 C1orf131Q8NDD1 294 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 OR6P1Q8NGX9 317 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 NAP1L3Q99457 506 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 NDNQ99608 321 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 VCXQ9H320 206 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 RETREG1Q9H6L5 497 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 OSGEPQ9NPF4 335 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 CROTQ9UKG9 612 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 CTDP1Q9Y5B0 961 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 SLC4A7Q9Y6M7 1214 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ABCC4O15439 1325 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 DNM1LO00429 736 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 TM4SF5O14894 197 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 IKBKBO14920 756 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 DIAPH2O60879 1101 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ATE1O95260 518 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 CYP11A1P05108 521 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ARL4DP49703 201 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 NEK2P51955 445 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 OXCT1P55809 520 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 KRT76Q01546 638 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 FOXD4Q12950 439 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 IFI16Q16666 785 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ZMYM1Q5SVZ6 1142 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ERICH1Q86X53 443 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 VSTM4Q8IW00 320 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 ARHGAP18Q8N392 663 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 NEK9Q8TD19 979 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms