RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 GPR32O75388 356 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 RPS6KA5O75582 802 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 STBD1O95210 358 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 HMGN5P82970 282 aaKnown RBP25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 SAFBQ15424 915 aaKnown RBP eCLIP25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 RALGAPA2Q2PPJ7 1873 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 MTERF2Q49AM1 385 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 RTN4RL1Q86UN2 441 aaPredicted RBP25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 C8orf76Q96K31 380 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 SAMD11Q96NU1 681 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 OSMRQ99650 979 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 C17orf80Q9BSJ5 609 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 TSPYL2Q9H2G4 693 aaPredicted RBP25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 SUGCTQ9HAC7 445 aa25.33■■□□□ 1.65
PTP4A1-203ENST00000473334 REV3LO60673 3130 aa25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 DKC1O60832 514 aaKnown RBP eCLIP25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 GUCY1B3Q02153 619 aa25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 NFX1Q12986 1120 aaKnown RBP25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 ZNF710Q8N1W2 664 aa25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 TMX1Q9H3N1 280 aa25.32■■□□□ 1.64
PTP4A1-203ENST00000473334 PRRC2BQ5JSZ5 2229 aaKnown RBP25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 GPR182O15218 404 aa25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 QARSP47897 775 aaKnown RBP25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 FBXO22Q8NEZ5 403 aa25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 RC3H2Q9HBD1 1191 aaKnown RBP25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 ADGRA3Q8IWK6 1321 aa25.31■■□□□ 1.64
PTP4A1-203ENST00000473334 TMEM150BA6NC51 233 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 DDX11L8A8MPP1 907 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 ST18O60284 1047 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 P4HBP07237 508 aaKnown RBP25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 NLRP11P59045 1033 aaKnown RBP25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 EPHA7Q15375 998 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 CALCRLQ16602 461 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 NCAPH2Q6IBW4 605 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 FAM228AQ86W67 206 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 NPAS4Q8IUM7 802 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 FIBCD1Q8N539 461 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 FAM184AQ8NB25 1140 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 CEP89Q96ST8 783 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 PRDM6Q9NQX0 595 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 LMCD1Q9NZU5 365 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 ST3GAL5Q9UNP4 418 aa25.3■■□□□ 1.64
PTP4A1-203ENST00000473334 WNT7AO00755 349 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 NEMFO60524 1076 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 STAG3L1P0CL83 205 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 SPIRE1Q08AE8 756 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 EPC2Q52LR7 807 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 ANO5Q75V66 913 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 IL27Q8NEV9 243 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 ZNF689Q96CS4 500 aaPredicted RBP25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 SH2D3AQ9BRG2 576 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 ADAMTS10Q9H324 1103 aa25.29■■□□□ 1.64
PTP4A1-203ENST00000473334 IGKV6-21A0A0C4DH24 114 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 MGEA5O60502 916 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 DGKIO75912 1065 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 GPC3P51654 580 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 PLA2G4FQ68DD2 849 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 CRIPAKQ8N1N5 446 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 THEGQ9P2T0 379 aa25.28■■□□□ 1.64
PTP4A1-203ENST00000473334 DENND3A2RUS2 1198 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 SARSP49591 514 aaKnown RBP25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 C4orf19Q8IY42 314 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 TMEM192Q8IY95 271 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 FBXO18Q8NFZ0 1043 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 SCLT1Q96NL6 688 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 ADAM2Q99965 735 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 JPH2Q9BR39 696 aaPredicted RBP25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 LXNQ9BS40 222 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 FOXP1Q9H334 677 aaPredicted RBP25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 RGS18Q9NS28 235 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 C1orf112Q9NSG2 853 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 WRAP73Q9P2S5 460 aaPredicted RBP25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 PCDHA12Q9UN75 941 aa25.27■■□□□ 1.64
PTP4A1-203ENST00000473334 DLL1O00548 723 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 MAFO75444 373 aaPredicted RBP25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 EIF4BP23588 611 aaKnown RBP25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 DNM2P50570 870 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 DRP2Q13474 957 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 BTG3Q14201 252 aaPredicted RBP25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 DYDC2Q96IM9 177 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 ZNF668Q96K58 619 aaPredicted RBP25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 CYP26B1Q9NR63 512 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 RNF216Q9NWF9 866 aaPredicted RBP25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 RGL1Q9NZL6 768 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 LRFN2Q9ULH4 789 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 RWDD3Q9Y3V2 267 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 PPME1Q9Y570 386 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 ARID2Q68CP9 1835 aa25.26■■□□□ 1.63
PTP4A1-203ENST00000473334 CDC42EP1Q00587 391 aa25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 CMTR2Q8IYT2 770 aaKnown RBP25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 NLRP7Q8WX94 980 aa25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 MTMR9Q96QG7 549 aa25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 ZSWIM4Q9H7M6 989 aa25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 TTC12Q9H892 705 aaPredicted RBP25.25■■□□□ 1.63
PTP4A1-203ENST00000473334 H3BNC9 293 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 LINC00271P0C7V0 271 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 DARSP14868 501 aaKnown RBP25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 ATP2B1P20020 1258 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 CTNNB1P35222 781 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 NPEPPSP55786 919 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms