RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CAGE1Q8TC20 777 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 AFAP1L1Q8TED9 768 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 DCAF4Q8WV16 495 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 PABPC5Q96DU9 382 aaKnown RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 GMCL1Q96IK5 515 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 LZTS2Q9BRK4 669 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 SPZ1Q9BXG8 430 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 GZF1Q9H116 711 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-205ENST00000472928 CPVLQ9H3G5 476 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 GJB4Q9NTQ9 266 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 VPS54Q9P1Q0 977 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 PRKAG3Q9UGI9 489 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 MUTYHQ9UIF7 546 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 MICAL3Q7RTP6 2002 aa7.26□□□□□ -1.25
HDAC1-205ENST00000472928 FIBPO43427 364 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 PLA2G6O60733 806 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 ARIH2O95376 493 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 SNHG28P0DPA3 235 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 XBP1P17861 261 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 EDNRBP24530 442 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 LTBRP36941 435 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 SLC1A4P43007 532 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 STAT2P52630 851 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 HTRA4P83105 476 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 KCNC4Q03721 635 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 DNM1Q05193 864 aaKnown RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 IKQ13123 557 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 BAATQ14032 418 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 PKN1Q16512 942 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 PFKFB3Q16875 520 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 SLC35G1Q2M3R5 365 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 TRIM71Q2Q1W2 868 aaKnown RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 TIGD5Q53EQ6 642 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 GPATCH4Q5T3I0 446 aaKnown RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 KCTD1Q719H9 257 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 HEATR3Q7Z4Q2 680 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 FAM160B2Q86V87 743 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 SESTD1Q86VW0 696 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 HOMER1Q86YM7 354 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 FBXO18Q8NFZ0 1043 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 KAT2BQ92831 832 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 WNT8BQ93098 351 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 SEC63Q9UGP8 760 aaKnown RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 DOLKQ9UPQ8 538 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 V9GY48 417 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-205ENST00000472928 DMDP11532 3685 aa7.25□□□□□ -1.25
HDAC1-205ENST00000472928 LOC102724159A0A0B4J2E5 919 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 ESPNB1AK53 854 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 NFIBO00712 420 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 NKRFO15226 690 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CYTH3O43739 400 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 KPNA6O60684 536 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 EFCAB14O75071 495 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 MMP1P03956 469 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 ICAM1P05362 532 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CKBP12277 381 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 PTMSP20962 102 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 KRT85P78386 507 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 PWP2Q15269 919 aaKnown RBP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 SAFBQ15424 915 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 EPC2Q52LR7 807 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 BRDTQ58F21 947 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 WWC2Q6AWC2 1192 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 FAM173BQ6P4H8 233 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 SLC30A10Q6XR72 485 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.24□□□□□ -1.252e-9■■□□□ 12.8
HDAC1-205ENST00000472928 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 BMP8AQ7Z5Y6 402 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 DIS3L2Q8IYB7 885 aaKnown RBP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CCDC155Q8N6L0 562 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 RGS22Q8NE09 1264 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CCDC148Q8NFR7 591 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CHURC1Q8WUH1 139 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 RRP36Q96EU6 259 aaKnown RBP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 UBA5Q9GZZ9 404 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 ZSCAN16Q9H4T2 348 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-205ENST00000472928 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 HCSTQ9UBK5 93 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 CCPG1Q9ULG6 757 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 KCNJ14Q9UNX9 436 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 INSL6Q9Y581 213 aa7.24□□□□□ -1.25
HDAC1-205ENST00000472928 KIAA1217Q5T5P2 1943 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 H3BNC9 293 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 STXBP3O00186 592 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 LGR5O75473 907 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 PARNO95453 639 aaKnown RBP7.23□□□□□ -1.25
HDAC1-205ENST00000472928 MMP3P08254 477 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 KRT2P35908 639 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 SLC16A2P36021 539 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 NAPAP54920 295 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CLDN10P78369 228 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 FOXK2Q01167 660 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 DLX2Q07687 328 aaPredicted RBP7.23□□□□□ -1.25
HDAC1-205ENST00000472928 GPM6BQ13491 265 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 SMAD2Q15796 467 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms