RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
COMMD3-210ENST00000472610 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
COMMD3-210ENST00000472610 PPME1Q9Y570 386 aa19.13■□□□□ 0.65
COMMD3-210ENST00000472610 TTC3P53804 2025 aa19.13■□□□□ 0.65
COMMD3-210ENST00000472610 COL6A3P12111 3177 aa19.13■□□□□ 0.65
COMMD3-210ENST00000472610 COL4A6Q14031 1691 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 RBAK-RBAKDNI3L0D1 243 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 GPR32O75388 356 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 STAG3L1P0CL83 205 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 NLRP11P59045 1033 aaKnown RBP19.12■□□□□ 0.65
COMMD3-210ENST00000472610 SPIRE1Q08AE8 756 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 ORC2Q13416 577 aaPredicted RBP19.12■□□□□ 0.65
COMMD3-210ENST00000472610 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
COMMD3-210ENST00000472610 NCAPH2Q6IBW4 605 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 RTN4RL1Q86UN2 441 aaPredicted RBP19.12■□□□□ 0.65
COMMD3-210ENST00000472610 C4orf19Q8IY42 314 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 LRRC71Q8N4P6 559 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 TSPYL2Q9H2G4 693 aaPredicted RBP19.12■□□□□ 0.65
COMMD3-210ENST00000472610 ERVK-5Q9HDB9 667 aa19.12■□□□□ 0.65
COMMD3-210ENST00000472610 RFXAPO00287 272 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 TMEM266Q2M3C6 531 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 ANO5Q75V66 913 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 OTUD6AQ7L8S5 288 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.11■□□□□ 0.65
COMMD3-210ENST00000472610 TMEM40Q8WWA1 233 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 TMX3Q96JJ7 454 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 CEP89Q96ST8 783 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 OSMRQ99650 979 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 ZSWIM4Q9H7M6 989 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 TTC12Q9H892 705 aaPredicted RBP19.11■□□□□ 0.65
COMMD3-210ENST00000472610 LMCD1Q9NZU5 365 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 ST3GAL5Q9UNP4 418 aa19.11■□□□□ 0.65
COMMD3-210ENST00000472610 IGKV6-21A0A0C4DH24 114 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 EPOPA6NHQ4 379 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 MAFO75444 373 aaPredicted RBP19.1■□□□□ 0.65
COMMD3-210ENST00000472610 EIF4BP23588 611 aaKnown RBP19.1■□□□□ 0.65
COMMD3-210ENST00000472610 TXKP42681 527 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 NPAS4Q8IUM7 802 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 NEK9Q8TD19 979 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 LINC01599Q8WXQ3 324 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 MTMR9Q96QG7 549 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 PPP1R16BQ96T49 567 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 ADAMTS10Q9H324 1103 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 CYP26B1Q9NR63 512 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 C1orf112Q9NSG2 853 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 MTCH2Q9Y6C9 303 aa19.1■□□□□ 0.65
COMMD3-210ENST00000472610 TMEM150BA6NC51 233 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 DGKIO75912 1065 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 ATP2B1P20020 1258 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 MCM7P33993 719 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 TRAPPC10P48553 1259 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 GPC3P51654 580 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 GRB10Q13322 594 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 FAM228AQ86W67 206 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 NOSTRINQ8IVI9 506 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 FIBCD1Q8N539 461 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 FBXO22Q8NEZ5 403 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 PPM1EQ8WY54 764 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 DYDC2Q96IM9 177 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 SCLT1Q96NL6 688 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 LXNQ9BS40 222 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 TMX1Q9H3N1 280 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 RGS18Q9NS28 235 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 RGL1Q9NZL6 768 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 MTUS1Q9ULD2 1270 aa19.09■□□□□ 0.65
COMMD3-210ENST00000472610 NOL7Q9UMY1 257 aaKnown RBP19.09■□□□□ 0.65
COMMD3-210ENST00000472610 RALGAPA2Q2PPJ7 1873 aa19.08■□□□□ 0.65
COMMD3-210ENST00000472610 NLRC5Q86WI3 1866 aa19.08■□□□□ 0.65
COMMD3-210ENST00000472610 DENND3A2RUS2 1198 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 WNT7AO00755 349 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SLITRK3O94933 977 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 U2AF2P26368 475 aaKnown RBP eCLIP19.08■□□□□ 0.642e-8■■■□□ 15.6
COMMD3-210ENST00000472610 YWHABP31946 246 aaKnown RBP19.08■□□□□ 0.64
COMMD3-210ENST00000472610 RFC5P40937 340 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SARSP49591 514 aaKnown RBP19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SLC24A5Q71RS6 500 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SPRED2Q7Z698 418 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 TPH2Q8IWU9 490 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 CRIPAKQ8N1N5 446 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SLC7A3Q8WY07 619 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 ZNF689Q96CS4 500 aaPredicted RBP19.08■□□□□ 0.64
COMMD3-210ENST00000472610 CEP170P1Q96L14 293 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 ADAM2Q99965 735 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 EIF2AK1Q9BQI3 630 aaKnown RBP19.08■□□□□ 0.64
COMMD3-210ENST00000472610 SH2D3AQ9BRG2 576 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 C17orf80Q9BSJ5 609 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 LRFN2Q9ULH4 789 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 RWDD3Q9Y3V2 267 aa19.08■□□□□ 0.64
COMMD3-210ENST00000472610 ADGRA3Q8IWK6 1321 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 GAS2O43903 313 aaKnown RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 LPXNO60711 386 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 LYPLA2O95372 231 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 DARSP14868 501 aaKnown RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 NPEPPSP55786 919 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 CTTNQ14247 550 aaKnown RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 CCDC85BQ15834 202 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-210ENST00000472610 EPC2Q52LR7 807 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 PLA2G4FQ68DD2 849 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 ZNF410Q86VK4 478 aa19.07■□□□□ 0.64
COMMD3-210ENST00000472610 TMEM192Q8IY95 271 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms