RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TPH2Q8IWU9 490 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ETNPPLQ8TBG4 499 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 TCP11Q8WWU5 503 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 CEP170P1Q96L14 293 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 DACT1Q9NYF0 836 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 EYSQ5T1H1 3165 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
TSPAN1-205ENST00000472170 LINC01553A4QN01 128 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 SLC37A4O43826 429 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 NEMFO60524 1076 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 JAK2O60674 1132 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 C22orf31O95567 290 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 VTNP04004 478 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 SKIP12755 728 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 ATP4AP20648 1035 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 IBSPP21815 317 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 EIF4BP23588 611 aaKnown RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 RFC5P40937 340 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 POLGP54098 1239 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 NR5A1Q13285 461 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 BMS1Q14692 1282 aaKnown RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 KIZQ2M2Z5 673 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 SLC24A5Q71RS6 500 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 TMCO2Q7Z6W1 182 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 C4orf19Q8IY42 314 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 ABI1Q8IZP0 508 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 NEK9Q8TD19 979 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 ATXN2LQ8WWM7 1075 aaKnown RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 PPP2R3CQ969Q6 453 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 ATP6V0A4Q9HBG4 840 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 SUCLA2Q9P2R7 463 aaPredicted RBP9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 ST3GAL5Q9UNP4 418 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 COG5Q9UP83 839 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 WDR81Q562E7 1941 aa9.37□□□□□ -0.91
TSPAN1-205ENST00000472170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 NCK2O43639 380 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 LARGE1O95461 756 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 XRCC6P12956 609 aaKnown RBP eCLIP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 YWHABP31946 246 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 MCM7P33993 719 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 CLCN3P51790 818 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 MRPS5P82675 430 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 GPM6BQ13491 265 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 TFDP1Q14186 410 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 NPY5RQ15761 445 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 NAALADL2Q58DX5 795 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 XKR9Q5GH70 373 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 MCTP1Q6DN14 999 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 ZNF410Q86VK4 478 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 RHPN2Q8IUC4 686 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 GJA10Q969M2 543 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 OSMRQ99650 979 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 ADAM2Q99965 735 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 C11orf84Q9BUA3 381 aaPredicted RBP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 PLVAPQ9BX97 442 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 CYP26B1Q9NR63 512 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 SMC3Q9UQE7 1217 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 PCDHB12Q9Y5F1 795 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 LOXHD1Q8IVV2 1947 aa9.36□□□□□ -0.91
TSPAN1-205ENST00000472170 PRUNE2Q8WUY3 3088 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 ZNF862O60290 1169 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 GPR32O75388 356 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 MAFO75444 373 aaPredicted RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 CTNNB1P35222 781 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 BMPR1AP36894 532 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 SARSP49591 514 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 GRB10Q13322 594 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 MXD4Q14582 209 aaPredicted RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 ZNF174Q15697 407 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 EPC2Q52LR7 807 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 HAUS3Q68CZ6 603 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 CMTR2Q8IYT2 770 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 LRRC71Q8N4P6 559 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 RSPH1Q8WYR4 309 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 ZBTB10Q96DT7 871 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
TSPAN1-205ENST00000472170 PPP1R16BQ96T49 567 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms