RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 IER5Q5VY09 327 aa16.94■□□□□ 0.3
CALD1-215ENST00000472096 SLFN12Q8IYM2 578 aa16.94■□□□□ 0.3
CALD1-215ENST00000472096 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
CALD1-215ENST00000472096 APBB2Q92870 758 aa16.94■□□□□ 0.3
CALD1-215ENST00000472096 KDM3AQ9Y4C1 1321 aa16.94■□□□□ 0.3
CALD1-215ENST00000472096 MARCH6O60337 910 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
CALD1-215ENST00000472096 CALCRLQ16602 461 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
CALD1-215ENST00000472096 TSHZ1Q6ZSZ6 1077 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
CALD1-215ENST00000472096 KIAA0319LQ8IZA0 1049 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 NME8Q8N427 588 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
CALD1-215ENST00000472096 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
CALD1-215ENST00000472096 STXBP5LQ9Y2K9 1186 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 COL4A6Q14031 1691 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 RALGAPA2Q2PPJ7 1873 aa16.93■□□□□ 0.3
CALD1-215ENST00000472096 CHD7Q9P2D1 2997 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 COL6A3P12111 3177 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 STBD1O95210 358 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 PSMC5P62195 406 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 XKR3Q5GH77 459 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 PPP2R2DQ66LE6 453 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 NOSTRINQ8IVI9 506 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 LINC01465Q8N7H1 131 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
CALD1-215ENST00000472096 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 SQORQ9Y6N5 450 aa16.92■□□□□ 0.3
CALD1-215ENST00000472096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 TMEM150BA6NC51 233 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 MAGEB2O15479 319 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 TLL1O43897 1013 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 GJB5O95377 273 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 AMHP03971 560 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 CA3P07451 260 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 CLCN3P51790 818 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 GNL2Q13823 731 aaKnown RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 GRIN2CQ14957 1233 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 EPHA7Q15375 998 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 MYOCDQ8IZQ8 938 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 MYLIPQ8WY64 445 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 MTMR9Q96QG7 549 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 AGO3Q9H9G7 860 aaKnown RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.91■□□□□ 0.3
CALD1-215ENST00000472096 KIAA1671Q9BY89 1806 aa16.91■□□□□ 0.3
CALD1-215ENST00000472096 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
CALD1-215ENST00000472096 GJB2P29033 226 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 CD52P31358 61 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 MCM7P33993 719 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 QARSP47897 775 aaKnown RBP16.9■□□□□ 0.3
CALD1-215ENST00000472096 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
CALD1-215ENST00000472096 MTERF2Q49AM1 385 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 LRRC71Q8N4P6 559 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 CEP89Q96ST8 783 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 LXNQ9BS40 222 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CALD1-215ENST00000472096 WRAP73Q9P2S5 460 aaPredicted RBP16.9■□□□□ 0.3
CALD1-215ENST00000472096 DKC1O60832 514 aaKnown RBP eCLIP16.89■□□□□ 0.29
CALD1-215ENST00000472096 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 VTNP04004 478 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
CALD1-215ENST00000472096 TRAPPC10P48553 1259 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 PAK2Q13177 524 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 PLA2G4FQ68DD2 849 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 EFCAB12Q6NXP0 572 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 FAM117BQ6P1L5 589 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 ANO5Q75V66 913 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 PPP1R16BQ96T49 567 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.29
CALD1-215ENST00000472096 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 GINS2Q9Y248 185 aa16.89■□□□□ 0.29
CALD1-215ENST00000472096 ARIH1Q9Y4X5 557 aaPredicted RBP16.89■□□□□ 0.29
CALD1-215ENST00000472096 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 TMOD1P28289 359 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 TXKP42681 527 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 CYP4A11Q02928 519 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 KIZQ2M2Z5 673 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 LINC01599Q8WXQ3 324 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 DYDC2Q96IM9 177 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 OSMRQ99650 979 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 SH2D3AQ9BRG2 576 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 PRDM12Q9H4Q4 367 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
CALD1-215ENST00000472096 RGL1Q9NZL6 768 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms