RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NELFCDQ8IXH7 590 aa8.78□□□□□ -1
SMC4-212ENST00000470240 OGFOD1Q8N543 542 aa8.78□□□□□ -1
SMC4-212ENST00000470240 HPS3Q969F9 1004 aa8.78□□□□□ -1
SMC4-212ENST00000470240 DNAJC19Q96DA6 116 aa8.78□□□□□ -1
SMC4-212ENST00000470240 PURBQ96QR8 312 aaKnown RBP8.78□□□□□ -1
SMC4-212ENST00000470240 CSRNP1Q96S65 589 aa8.78□□□□□ -1
SMC4-212ENST00000470240 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
SMC4-212ENST00000470240 FUT8Q9BYC5 575 aa8.78□□□□□ -1
SMC4-212ENST00000470240 WDR11Q9BZH6 1224 aa8.78□□□□□ -1
SMC4-212ENST00000470240 ANKZF1Q9H8Y5 726 aa8.78□□□□□ -1
SMC4-212ENST00000470240 MED4Q9NPJ6 270 aa8.78□□□□□ -1
SMC4-212ENST00000470240 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
SMC4-212ENST00000470240 DAAM1Q9Y4D1 1078 aa8.78□□□□□ -1
SMC4-212ENST00000470240 SIPA1L1O43166 1804 aa8.77□□□□□ -1
SMC4-212ENST00000470240 FRMD3A2A2Y4 597 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 DDTLA6NHG4 134 aaPredicted RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 E9PMD0 336 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 GCOM1H8Y6P7 765 aaPredicted RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 PIK3CDO00329 1044 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 GDF11O95390 407 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 EYA4O95677 639 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 GH2P01242 217 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 ATP1A1P05023 1023 aaKnown RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 CYP3A4P08684 503 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CCDC172P0C7W6 258 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 POLR2MP0CAP2 368 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 XRCC5P13010 732 aaKnown RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 NR2F2P24468 414 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 MMP14P50281 582 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CACNB3P54284 484 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 LRRC41Q15345 812 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 KNOP1Q1ED39 458 aaKnown RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 ZCWPW2Q504Y3 356 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 KRT26Q7Z3Y9 468 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 KCNK18Q7Z418 384 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 TRIM59Q8IWR1 403 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CCDC116Q8IYX3 515 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 SYT2Q8N9I0 419 aaPredicted RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 GOLGA5Q8TBA6 731 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 ETNPPLQ8TBG4 499 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 FAM71BQ8TC56 605 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 NEK9Q8TD19 979 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 TAF4BQ92750 862 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 EEF2KMTQ96G04 330 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CAPZA3Q96KX2 299 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 SPAG5Q96R06 1193 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 KCTD15Q96SI1 283 aaPredicted RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 CRACR2AQ9BSW2 395 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 DNAJC18Q9H819 358 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 VIPAS39Q9H9C1 493 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 TUFT1Q9NNX1 390 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 TYW1Q9NV66 732 aaKnown RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 STK32BQ9NY57 414 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 KCND2Q9NZV8 630 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 CWC15Q9P013 229 aaKnown RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 SEL1LQ9UBV2 794 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 TRIM10Q9UDY6 481 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 ARMCX3Q9UH62 379 aaPredicted RBP8.77□□□□□ -1.01
SMC4-212ENST00000470240 TCEAL9Q9UHQ7 104 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 PNMA2Q9UL42 364 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 SNX12Q9UMY4 172 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 ATAD5Q96QE3 1844 aa8.77□□□□□ -1.01
SMC4-212ENST00000470240 SLX4Q8IY92 1834 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 A0A0U1RQJ8 604 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 RBAK-RBAKDNI3L0D1 243 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 PDXKO00764 312 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 ENC1O14682 589 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 MAP2K7O14733 419 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 MEIS2O14770 477 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 EIF3DO15371 548 aaKnown RBP eCLIP8.76□□□□□ -1.012e-16■■■■■ 56.2
SMC4-212ENST00000470240 PJA2O43164 708 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 MED24O75448 989 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 AFPP02771 609 aaKnown RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 SLC12A3P55017 1021 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 POLR2FP61218 127 aaKnown RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 KLHL30Q0D2K2 578 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 PABPC4Q13310 644 aaKnown RBP eCLIP8.76□□□□□ -1.018e-9■■■■■ 603.5
SMC4-212ENST00000470240 DLGAP5Q15398 846 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 AOC3Q16853 763 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 GLE1Q53GS7 698 aaKnown RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 BEND6Q5SZJ8 279 aaPredicted RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 LEKR1Q6ZMV7 388 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 SFR1Q86XK3 245 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 RTKN2Q8IZC4 609 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 ATRIPQ8WXE1 791 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 EXOC4Q96A65 974 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.76□□□□□ -1.017e-7■■□□□ 12.7
SMC4-212ENST00000470240 TDRD3Q9H7E2 651 aaKnown RBP8.76□□□□□ -1.01
SMC4-212ENST00000470240 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 NLRC4Q9NPP4 1024 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 TBC1D7Q9P0N9 293 aa8.76□□□□□ -1.01
SMC4-212ENST00000470240 ARHGAP20Q9P2F6 1191 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms