RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NFS1Q9Y697 457 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 CEP104O60308 925 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 BMP3P12645 472 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 PSMC2P35998 433 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 STAT1P42224 750 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 NOP2P46087 812 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 ZNF131P52739 623 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 CACNB3P54284 484 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 RNASE9P60153 205 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 CYP4A11Q02928 519 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 PPP2R5CQ13362 524 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 ABCB5Q2M3G0 1257 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 LNX1Q8TBB1 728 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 GOLPH3Q9H4A6 298 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 SLITRK6Q9H5Y7 841 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 TMBIM4Q9HC24 238 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 RGL1Q9NZL6 768 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 FRMPD4Q14CM0 1322 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 SCN9AQ15858 1988 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 CLIC2O15247 247 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 RAD21O60216 631 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 PSMD10O75832 226 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 SLITRK3O94933 977 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 PDCLQ13371 301 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 USH1GQ495M9 461 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 GJB7Q6PEY0 223 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 TADA2BQ86TJ2 420 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 STK33Q9BYT3 514 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 KCNQ5Q9NR82 932 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 SEL1LQ9UBV2 794 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 FAM169AQ9Y6X4 670 aa14.88□□□□□ -0.03
BRCA1-209ENST00000470026 F8VZ95 297 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 NR1D1P20393 614 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 SOX5P35711 763 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 JAG1P78504 1218 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 POU5F1Q01860 360 aaKnown RBP14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PPATQ06203 517 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 ITGB3BPQ13352 177 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-209ENST00000470026 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-209ENST00000470026 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PEX26Q7Z412 305 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 DNAAF5Q86Y56 855 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 SLC5A5Q92911 643 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 WDR18Q9BV38 432 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 GPR88Q9GZN0 384 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 EVI5O60447 810 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 TMEM253P0C7T8 217 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 LMNB1P20700 586 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 HSD17B3P37058 310 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 FMO5P49326 533 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 GALCP54803 685 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 SERPINA10Q9UK55 444 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 PRR12Q9ULL5 1215 aa14.87□□□□□ -0.03
BRCA1-209ENST00000470026 SLX4Q8IY92 1834 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 ANKRD65E5RJM6 399 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 FAM13AO94988 1023 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 HOXA13P31271 388 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 LSP1P33241 339 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 PPP2R5AQ15172 486 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 SPATS2Q86XZ4 545 aaKnown RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 KIAA0825Q8IV33 1275 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 FMNL3Q8IVF7 1028 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 MASTLQ96GX5 879 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 STRA6Q9BX79 667 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 EPN3Q9H201 632 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 PARVGQ9HBI0 331 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 KCND2Q9NZV8 630 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 DIS3Q9Y2L1 958 aaKnown RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 A0A1W2PRG0 241 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 G3V3G9 751 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 ENTPD3O75355 529 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 GDF11O95390 407 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 TAL1P17542 331 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 NMT1P30419 496 aaKnown RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 TRAF1Q13077 416 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 CTTNQ14247 550 aaKnown RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 TTC19Q6DKK2 380 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 B3GNT9Q6UX72 402 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 ZNF720Q7Z2F6 126 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 SLC9A9Q8IVB4 645 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 U2AF1L4Q8WU68 220 aaKnown RBP14.86□□□□□ -0.03
BRCA1-209ENST00000470026 RFFLQ8WZ73 363 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 AP1M1Q9BXS5 423 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 NEUROG2Q9H2A3 272 aa14.86□□□□□ -0.03
BRCA1-209ENST00000470026 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 SFI1A8K8P3 1242 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms