RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 LRRC8DQ7L1W4 858 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 OTUD6AQ7L8S5 288 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 TRIM50Q86XT4 487 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
FN1-216ENST00000469569 USP38Q8NB14 1042 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 ERMNQ8TAM6 284 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 LMBR1Q8WVP7 490 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 PCYT2Q99447 389 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 UNC45AQ9H3U1 944 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 GABBR1Q9UBS5 961 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 PCDHA2Q9Y5H9 948 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 SQORQ9Y6N5 450 aa10.25□□□□□ -0.77
FN1-216ENST00000469569 RANBP2P49792 3224 aaKnown RBP10.24□□□□□ -0.77
FN1-216ENST00000469569 SMIM35A0A1B0GVV1 85 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 RSPH10B2B2RC85 870 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 TREHO43280 583 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 BAIAP3O94812 1187 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 CFHP08603 1231 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 RSPH10BP0C881 870 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 CSF2RAP15509 400 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 MUTP22033 750 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 THPOP40225 353 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 DNM2P50570 870 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 CCL23P55773 120 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 TTC38Q5R3I4 469 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 ZSWIM4Q9H7M6 989 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 TTC12Q9H892 705 aaPredicted RBP10.24□□□□□ -0.77
FN1-216ENST00000469569 IGSF9BQ9UPX0 1349 aa10.24□□□□□ -0.77
FN1-216ENST00000469569 ABHD14A-ACY1A0A1B0GW23 586 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 CHMP2AO43633 222 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 OR52Z1P0C646 297 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 XRCC6P12956 609 aaKnown RBP eCLIP10.23□□□□□ -0.77
FN1-216ENST00000469569 ITGB8P26012 769 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 MCM7P33993 719 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 PRPHP41219 470 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 PDIA5Q14554 519 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 TRIM71Q2Q1W2 868 aaKnown RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 EARS2Q5JPH6 523 aaKnown RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 FAM26DQ5JW98 314 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 TMEM240Q5SV17 173 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 C4orf19Q8IY42 314 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 HERVK_113Q902F9 699 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 HAS1Q92839 578 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 APBB2Q92870 758 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 RNPC3Q96LT9 517 aaKnown RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 MTMR9Q96QG7 549 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 CTAGE1Q96RT6 745 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
FN1-216ENST00000469569 WNT8AQ9H1J5 351 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 ZSCAN16Q9H4T2 348 aaPredicted RBP10.23□□□□□ -0.77
FN1-216ENST00000469569 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
FN1-216ENST00000469569 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 LYPLA2O95372 231 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 CXCL10P02778 98 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 KLRC1P26715 233 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 TXKP42681 527 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 GCGRP47871 477 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 IGBP1P78318 339 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 SMAD3P84022 425 aaKnown RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 ZNF200P98182 395 aaPredicted RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 PRKCEQ02156 737 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 IKBKEQ14164 716 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 BECN1Q14457 450 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 ZNF618Q5T7W0 954 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 ARL6IP4Q66PJ3 421 aaKnown RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 CNKSR3Q6P9H4 555 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 ZNF365Q70YC5 407 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 PHOSPHO2Q8TCD6 241 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 SEPT8Q92599 483 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 DHX38Q92620 1227 aaKnown RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 MAP7D2Q96T17 732 aa10.22□□□□□ -0.77
FN1-216ENST00000469569 MYH9P35579 1960 aaKnown RBP10.22□□□□□ -0.77
FN1-216ENST00000469569 TMEM265A0A087WTH1 108 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 SLC26A4O43511 780 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 DTNBO60941 627 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 ATP4AP20648 1035 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 RFC5P40937 340 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 KCNJ6P48051 423 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 MRPS6P82932 125 aaKnown RBP10.21□□□□□ -0.77
FN1-216ENST00000469569 SHHQ15465 462 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 ZNF174Q15697 407 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 MARCH8Q5T0T0 291 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 NCAPH2Q6IBW4 605 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 DTHD1Q6ZMT9 781 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 SCLYQ96I15 445 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.77
FN1-216ENST00000469569 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.21□□□□□ -0.77
FN1-216ENST00000469569 TUFT1Q9NNX1 390 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 ANKEF1Q9NU02 776 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 TELO2Q9Y4R8 837 aa10.21□□□□□ -0.77
FN1-216ENST00000469569 SLC4A7Q9Y6M7 1214 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms