RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 KLHL25Q9H0H3 589 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 SLC12A7Q9Y666 1083 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 TNRC18O15417 2968 aaPredicted RBP6.51□□□□□ -1.37
VPS8-219ENST00000469479 RASSF10A6NK89 507 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 CYP27B1O15528 508 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 ECE1P42892 770 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 SLC6A11P48066 632 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 NKX3-2P78367 333 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 FBXW10Q5XX13 1052 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 SLFN13Q68D06 897 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 ADAT2Q7Z6V5 191 aaKnown RBP6.51□□□□□ -1.37
VPS8-219ENST00000469479 ARHGEF39Q8N4T4 335 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 IGDCC4Q8TDY8 1250 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 MBD6Q96DN6 1003 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 RCC1LQ96I51 464 aaKnown RBP6.51□□□□□ -1.37
VPS8-219ENST00000469479 INSRP06213 1382 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 ZNF831Q5JPB2 1677 aa6.51□□□□□ -1.37
VPS8-219ENST00000469479 PASKQ96RG2 1323 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 PDE4DIPQ5VU43 2346 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 A0A1W2PP64 1363 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 ROCK2O75116 1388 aaKnown RBP6.5□□□□□ -1.37
VPS8-219ENST00000469479 FLT4P35916 1363 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 KDRP35968 1356 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 ZNF623O75123 536 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 IL13P35225 146 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 PURAQ00577 322 aaKnown RBP6.5□□□□□ -1.37
VPS8-219ENST00000469479 ITPK1Q13572 414 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 DEFB115Q30KQ5 88 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 GCC1Q96CN9 775 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
VPS8-219ENST00000469479 MMP19Q99542 508 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 MARCH2Q9P0N8 246 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 CGGBP1Q9UFW8 167 aaPredicted RBP6.5□□□□□ -1.37
VPS8-219ENST00000469479 USP42Q9H9J4 1324 aaKnown RBP6.5□□□□□ -1.37
VPS8-219ENST00000469479 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
VPS8-219ENST00000469479 MAP2P11137 1827 aaKnown RBP6.49□□□□□ -1.37
VPS8-219ENST00000469479 ADAM9Q13443 819 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 RUFY4Q6ZNE9 571 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 MILR1Q7Z6M3 343 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 KBTBD2Q8IY47 623 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
VPS8-219ENST00000469479 C11orf21Q9P2W6 132 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 ING1Q9UK53 422 aaPredicted RBP6.49□□□□□ -1.37
VPS8-219ENST00000469479 ASAP1Q9ULH1 1129 aa6.49□□□□□ -1.37
VPS8-219ENST00000469479 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
VPS8-219ENST00000469479 TIAM2Q8IVF5 1701 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 H0YIN7 160 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 HSP90AB1P08238 724 aaKnown RBP6.48□□□□□ -1.37
VPS8-219ENST00000469479 CHRNA5P30532 468 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 CR1LQ2VPA4 569 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 PNMA8AQ86V59 439 aaPredicted RBP6.48□□□□□ -1.37
VPS8-219ENST00000469479 IFNL2Q8IZJ0 200 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 DPF3Q92784 378 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 YIPF4Q9BSR8 244 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
VPS8-219ENST00000469479 SBF1O95248 1867 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 ERVV-2B6SEH9 535 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 C22orf46C9J442 243 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 POLRMTO00411 1230 aaKnown RBP6.47□□□□□ -1.37
VPS8-219ENST00000469479 EPHX1P07099 455 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 THBDP07204 575 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 MAP2K2P36507 400 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 STAT5AP42229 794 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 DDR1Q08345 913 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 FHL2Q14192 279 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 HS1BP3Q53T59 392 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 RIOX2Q8IUF8 465 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 KLHL36Q8N4N3 616 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 SLC12A5Q9H2X9 1139 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 NCAPD2Q15021 1401 aa6.47□□□□□ -1.37
VPS8-219ENST00000469479 TONSLQ96HA7 1378 aa6.46□□□□□ -1.37
VPS8-219ENST00000469479 ITGB4P16144 1822 aa6.46□□□□□ -1.37
VPS8-219ENST00000469479 B4GALT4O60513 344 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 PLS3P13797 630 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 TM4SF1P30408 202 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 SLC7A5Q01650 507 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 MRPL58Q14197 206 aaKnown RBP6.46□□□□□ -1.38
VPS8-219ENST00000469479 FGD4Q96M96 766 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 TAOK3Q9H2K8 898 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 TAF1DQ9H5J8 278 aaPredicted RBP6.46□□□□□ -1.38
VPS8-219ENST00000469479 CLEC1BQ9P126 229 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 FTSJ1Q9UET6 329 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 ABT1Q9ULW3 272 aaKnown RBP6.46□□□□□ -1.38
VPS8-219ENST00000469479 WASHC2AQ641Q2 1341 aa6.46□□□□□ -1.38
VPS8-219ENST00000469479 PHKG2P15735 406 aa6.45□□□□□ -1.38
VPS8-219ENST00000469479 SMN1Q16637 294 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms