RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GJD3Q8N144 294 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 KLHL23Q8NBE8 558 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 ZNF274Q96GC6 653 aaPredicted RBP27.68■■■□□ 2.02
PTCH1-210ENST00000468211 TM6SF1Q9BZW5 370 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 UNC45AQ9H3U1 944 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 C11orf16Q9NQ32 467 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 PCDHA4Q9UN74 947 aa27.68■■■□□ 2.02
PTCH1-210ENST00000468211 M0R2N6 131 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 LINC01565O15544 149 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 FAM102BQ5T8I3 360 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 TRIM22Q8IYM9 498 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 LRRC71Q8N4P6 559 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 RIT2Q99578 217 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 HCSTQ9UBK5 93 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 PCDHB7Q9Y5E2 793 aa27.67■■■□□ 2.02
PTCH1-210ENST00000468211 DENND3A2RUS2 1198 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 GPR182O15218 404 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 GAS7O60861 476 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 TDP2O95551 362 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 IRS1P35568 1242 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 DSC3Q14574 896 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 PUS10Q3MIT2 529 aaKnown RBP27.66■■■□□ 2.02
PTCH1-210ENST00000468211 EFCAB12Q6NXP0 572 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 SLC24A5Q71RS6 500 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 ZNF668Q96K58 619 aaPredicted RBP27.66■■■□□ 2.02
PTCH1-210ENST00000468211 FAM167AQ96KS9 214 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 LRFN3Q9BTN0 628 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 ADAMTS10Q9H324 1103 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 IGFLR1Q9H665 355 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 CEP131Q9UPN4 1083 aa27.66■■■□□ 2.02
PTCH1-210ENST00000468211 MAGEB2O15479 319 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 DTNBO60941 627 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 DEXIO95424 95 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 OATP04181 439 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 NLRP11P59045 1033 aaKnown RBP27.65■■■□□ 2.02
PTCH1-210ENST00000468211 PRKCEQ02156 737 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 CLUL1Q15846 466 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 LRCH2Q5VUJ6 765 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 ADGRD2Q7Z7M1 963 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 BLIDQ8IZY5 108 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 TEKT3Q9BXF9 490 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 C1orf112Q9NSG2 853 aa27.65■■■□□ 2.02
PTCH1-210ENST00000468211 PI4K2BG5E9Z4 385 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 CPLX1O14810 134 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 TBX10O75333 385 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 PSMD10O75832 226 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 Q4G0T1 1027 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 NAALADL2Q58DX5 795 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 POF1BQ8WVV4 589 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 AKT3Q9Y243 479 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 PCDHGC5Q9Y5F6 944 aa27.64■■■□□ 2.02
PTCH1-210ENST00000468211 CYP3A7-CYP3A51PA0A087WV96 503 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 FAM86C2PA6NEL3 165 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 TBKBP1A7MCY6 615 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 NCK2O43639 380 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 FGFR1P11362 822 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 CYP3A7P24462 503 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 SSTR3P32745 418 aaPredicted RBP27.63■■■□□ 2.01
PTCH1-210ENST00000468211 FAM189BP81408 668 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 ODR4Q5SWX8 454 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 DAGLBQ8NCG7 672 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 NRBP2Q9NSY0 501 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 PDRG1Q9NUG6 133 aa27.63■■■□□ 2.01
PTCH1-210ENST00000468211 TMEM150BA6NC51 233 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 SFNP31947 248 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 JAK3P52333 1124 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 B3GNT9Q6UX72 402 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 MBOAT7Q96N66 472 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 KCNJ14Q9UNX9 436 aa27.62■■■□□ 2.01
PTCH1-210ENST00000468211 STBD1O95210 358 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 ADAM15Q13444 863 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 DRP2Q13474 957 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 TARBP2Q15633 366 aaKnown RBP27.61■■■□□ 2.01
PTCH1-210ENST00000468211 TMEM31Q5JXX7 168 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 FAM43BQ6ZT52 329 aaPredicted RBP27.61■■■□□ 2.01
PTCH1-210ENST00000468211 MAP7D2Q96T17 732 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 RNF19AQ9NV58 838 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 TYW1Q9NV66 732 aaKnown RBP27.61■■■□□ 2.01
PTCH1-210ENST00000468211 TMEM161AQ9NX61 479 aa27.61■■■□□ 2.01
PTCH1-210ENST00000468211 ZP2Q05996 745 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 SCRN1Q12765 414 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 MIER3Q7Z3K6 550 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 ETNPPLQ8TBG4 499 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 SH2D3AQ9BRG2 576 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 C22orf23Q9BZE7 217 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 ATP6V0A4Q9HBG4 840 aa27.6■■■□□ 2.01
PTCH1-210ENST00000468211 MBTPS2O43462 519 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 GPR37L1O60883 481 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 EIF4BP23588 611 aaKnown RBP27.59■■■□□ 2.01
PTCH1-210ENST00000468211 TMOD1P28289 359 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 GPC3P51654 580 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 INF2Q27J81 1249 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 SPOUT1Q5T280 376 aaKnown RBP27.59■■■□□ 2.01
PTCH1-210ENST00000468211 CEP89Q96ST8 783 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 CWH43Q9H720 699 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 GJB4Q9NTQ9 266 aa27.59■■■□□ 2.01
PTCH1-210ENST00000468211 SLC37A4O43826 429 aa27.58■■■□□ 2.01
PTCH1-210ENST00000468211 FGFR4P22455 802 aa27.58■■■□□ 2.01
PTCH1-210ENST00000468211 RBM23Q86U06 439 aaKnown RBP27.58■■■□□ 2.01
PTCH1-210ENST00000468211 COLGALT1Q8NBJ5 622 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms