RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 NFX1Q12986 1120 aaKnown RBP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 SAFBQ15424 915 aaKnown RBP eCLIP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 TMEM266Q2M3C6 531 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 POTEDQ86YR6 584 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 BANK1Q8NDB2 785 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 TMEM40Q8WWA1 233 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 LINC01599Q8WXQ3 324 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 ZNF689Q96CS4 500 aaPredicted RBP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 C17orf80Q9BSJ5 609 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 ADAMTS10Q9H324 1103 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 UNC80Q8N2C7 3258 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 IGKV6-21A0A0C4DH24 114 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 DGKIO75912 1065 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 FOSBP53539 338 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 ANO5Q75V66 913 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 LRRC71Q8N4P6 559 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 FBXO18Q8NFZ0 1043 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 C8orf76Q96K31 380 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 MTUS1Q9ULD2 1270 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 PCDHA12Q9UN75 941 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 AKT3Q9Y243 479 aa20.38■□□□□ 0.85
CGREF1-208ENST00000467539 SIP14410 1827 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 DLL1O00548 723 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 STAG3L1P0CL83 205 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 SPIRE1Q08AE8 756 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 MTERF2Q49AM1 385 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 EPC2Q52LR7 807 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 NPAS4Q8IUM7 802 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 TMEM192Q8IY95 271 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 FIBCD1Q8N539 461 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 OSMRQ99650 979 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
CGREF1-208ENST00000467539 RC3H2Q9HBD1 1191 aaKnown RBP20.37■□□□□ 0.85
CGREF1-208ENST00000467539 PRDM6Q9NQX0 595 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 RGS18Q9NS28 235 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 SEPT9Q9UHD8 586 aaPredicted RBP20.37■□□□□ 0.85
CGREF1-208ENST00000467539 TTC3P53804 2025 aa20.37■□□□□ 0.85
CGREF1-208ENST00000467539 WDR81Q562E7 1941 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 MAFO75444 373 aaPredicted RBP20.36■□□□□ 0.85
CGREF1-208ENST00000467539 EIF4BP23588 611 aaKnown RBP20.36■□□□□ 0.85
CGREF1-208ENST00000467539 DNM2P50570 870 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 FAM189BP81408 668 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 FAM228AQ86W67 206 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 C4orf19Q8IY42 314 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 ATXN2LQ8WWM7 1075 aaKnown RBP20.36■□□□□ 0.85
CGREF1-208ENST00000467539 MTMR9Q96QG7 549 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 PPP1R16BQ96T49 567 aa20.36■□□□□ 0.85
CGREF1-208ENST00000467539 FOXP1Q9H334 677 aaPredicted RBP20.36■□□□□ 0.85
CGREF1-208ENST00000467539 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
CGREF1-208ENST00000467539 TMEM150BA6NC51 233 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 ST18O60284 1047 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 MGEA5O60502 916 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 SLITRK3O94933 977 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 SARSP49591 514 aaKnown RBP20.35■□□□□ 0.85
CGREF1-208ENST00000467539 GPC3P51654 580 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 CALCRLQ16602 461 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 SLC24A5Q71RS6 500 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 EXOC8Q8IYI6 725 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 MICALL1Q8N3F8 863 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 FAM184AQ8NB25 1140 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 GDPD5Q8WTR4 605 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 CLP1Q92989 425 aaKnown RBP20.35■□□□□ 0.85
CGREF1-208ENST00000467539 ADAM2Q99965 735 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 JPH2Q9BR39 696 aaPredicted RBP20.35■□□□□ 0.85
CGREF1-208ENST00000467539 SH2D3AQ9BRG2 576 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 C1orf112Q9NSG2 853 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 RGL1Q9NZL6 768 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 PPME1Q9Y570 386 aa20.35■□□□□ 0.85
CGREF1-208ENST00000467539 PRRC2BQ5JSZ5 2229 aaKnown RBP20.35■□□□□ 0.85
CGREF1-208ENST00000467539 DENND3A2RUS2 1198 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 H3BNC9 293 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 WNT7AO00755 349 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 RB1P06400 928 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 BMPR1AP36894 532 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 DSC3Q14574 896 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 NCAPH2Q6IBW4 605 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 OTUD6AQ7L8S5 288 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 DYDC2Q96IM9 177 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 HSD17B14Q9BPX1 270 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 ZSWIM4Q9H7M6 989 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 TTC12Q9H892 705 aaPredicted RBP20.34■□□□□ 0.85
CGREF1-208ENST00000467539 CYP26B1Q9NR63 512 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 WRAP73Q9P2S5 460 aaPredicted RBP20.34■□□□□ 0.85
CGREF1-208ENST00000467539 RWDD3Q9Y3V2 267 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 PCDHB7Q9Y5E2 793 aa20.34■□□□□ 0.85
CGREF1-208ENST00000467539 C9IYK1 514 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 C5orf67F2Z3F1 127 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 NEMFO60524 1076 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 LINC00271P0C7V0 271 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 DARSP14868 501 aaKnown RBP20.33■□□□□ 0.85
CGREF1-208ENST00000467539 TXKP42681 527 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 NPEPPSP55786 919 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 DRP2Q13474 957 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 GPM6BQ13491 265 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 BTG3Q14201 252 aaPredicted RBP20.33■□□□□ 0.85
CGREF1-208ENST00000467539 EIF2AK1Q9BQI3 630 aaKnown RBP20.33■□□□□ 0.85
CGREF1-208ENST00000467539 SUCLA2Q9P2R7 463 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms