RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 IFT88Q13099 833 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 DHX34Q14147 1143 aaKnown RBP10.57□□□□□ -0.72
APTX-214ENST00000467331 SFR1Q86XK3 245 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 ATP8B4Q8TF62 1192 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 DCAF4Q8WV16 495 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 PGM2Q96G03 612 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 PSMD1Q99460 953 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 REEP2Q9BRK0 252 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
APTX-214ENST00000467331 TMEM109Q9BVC6 243 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 FAM129AQ9BZQ8 928 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 KDM4CQ9H3R0 1056 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 KLC4Q9NSK0 619 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 SERPINB13Q9UIV8 391 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 FRMPD4Q14CM0 1322 aa10.57□□□□□ -0.72
APTX-214ENST00000467331 TMCO5BA8MYB1 307 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 DAPK3O43293 454 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 CCDC172P0C7W6 258 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 HPDP32754 393 aaPredicted RBP10.56□□□□□ -0.72
APTX-214ENST00000467331 SHMT1P34896 483 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 SOX5P35711 763 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 RNASE9P60153 205 aaKnown RBP10.56□□□□□ -0.72
APTX-214ENST00000467331 IFFO1Q0D2I5 559 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 ERMARDQ5T6L9 678 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 DUPD1Q68J44 220 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 CACNA2D3Q8IZS8 1091 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 UBLCP1Q8WVY7 318 aaPredicted RBP10.56□□□□□ -0.72
APTX-214ENST00000467331 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
APTX-214ENST00000467331 MKL1Q969V6 931 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 SEC16BQ96JE7 1060 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 AP1M1Q9BXS5 423 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 STK33Q9BYT3 514 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 CCDC134Q9H6E4 229 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 GCNT4Q9P109 453 aa10.56□□□□□ -0.72
APTX-214ENST00000467331 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 EYA4O95677 639 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 DRD4P21917 467 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 GALCP54803 685 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 XRCC4Q13426 336 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 BYSLQ13895 437 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 PREPLQ4J6C6 727 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 WLSQ5T9L3 541 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-214ENST00000467331 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 FMO2Q99518 471 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 OSBPL7Q9BZF2 842 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 SLC40A1Q9NP59 571 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 PPANQ9NQ55 473 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 CNOT8Q9UFF9 292 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 AMACRQ9UHK6 382 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 AJAP1Q9UKB5 411 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 NOVA2Q9UNW9 492 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 LOXHD1Q8IVV2 1947 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 GOLGA6L10A0A0M3HER8 536 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 TTI1O43156 1089 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 C21orf2O43822 256 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 BBOX1O75936 387 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 GSTA1P08263 222 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 ITGA4P13612 1032 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 MUTP22033 750 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 FLT3P36888 993 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 SREBF1P36956 1147 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 DHX9Q08211 1270 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 PLS1Q14651 629 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 GKAP1Q5VSY0 366 aaPredicted RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 LENG9Q96B70 501 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 SEL1LQ9UBV2 794 aa10.55□□□□□ -0.72
APTX-214ENST00000467331 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
APTX-214ENST00000467331 PFASO15067 1338 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 MIF4GDA9UHW6 222 aaKnown RBP10.54□□□□□ -0.72
APTX-214ENST00000467331 MEIS2O14770 477 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 ASAP2O43150 1006 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 EVI5O60447 810 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
APTX-214ENST00000467331 GGPS1O95749 300 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 RFC4P35249 363 aa10.54□□□□□ -0.72
APTX-214ENST00000467331 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms