RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TSR2Q969E8 191 aaKnown RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 KAZALD1Q96I82 304 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 SUCLG2Q96I99 432 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 DHX36Q9H2U1 1008 aaKnown RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 ABCB6Q9NP58 842 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 DDX4Q9NQI0 724 aaKnown RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 SLC5A4Q9NY91 659 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 FLRT1Q9NZU1 646 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-207ENST00000467273 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 GGT7Q9UJ14 662 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 PCDHGB7Q9Y5F8 929 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 MROH7-TTC4A0A0A0MT08 1334 aa6.67□□□□□ -1.34
PTCD3-207ENST00000467273 GPR75-ASB3A0A0A6YYF3 556 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 F6X3S4 739 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 POU3F3P20264 500 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 ADCYAP1R1P41586 468 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 ST13P50502 369 aaKnown RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 EPHB4P54760 987 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 RHBDL3P58872 404 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 RACK1P63244 317 aaKnown RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 IKZF1Q13422 519 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PPIGQ13427 754 aaKnown RBP eCLIP6.66□□□□□ -1.341e-7■■□□□ 13.3
PTCD3-207ENST00000467273 PICALMQ13492 652 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 LRRC41Q15345 812 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 MPZL3Q6UWV2 235 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 HS2ST1Q7LGA3 356 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 SLC44A5Q8NCS7 719 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PPM1EQ8WY54 764 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 C12orf42Q96LP6 360 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PAGR1Q9BTK6 254 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 MTIF3Q9H2K0 278 aaKnown RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PRDM12Q9H4Q4 367 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 BICC1Q9H694 974 aaKnown RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 CCSER2Q9H7U1 834 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PI4KBQ9UBF8 816 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 MSRAQ9UJ68 235 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 COG5Q9UP83 839 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-207ENST00000467273 MROH7Q68CQ1 1323 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 ROBO3Q96MS0 1386 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 PLXNA1Q9UIW2 1896 aa6.66□□□□□ -1.34
PTCD3-207ENST00000467273 DCDC2CA8MYV0 355 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 PRR33A8MZF0 331 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 EYA2O00167 538 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 RNGTTO60942 597 aaKnown RBP6.65□□□□□ -1.34
PTCD3-207ENST00000467273 VAMP4O75379 141 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 B3GALT4O96024 378 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 TIMP1P01033 207 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 LDHCP07864 332 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 NBPF7P0C2Y1 421 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-207ENST00000467273 ITGB8P26012 769 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 CYP2C19P33261 490 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 BTDP43251 543 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 MRE11P49959 708 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 OXCT1P55809 520 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 GSTO1P78417 241 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 MFSD5Q6N075 450 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 PSRC1Q6PGN9 363 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-207ENST00000467273 CCDC129Q6ZRS4 1044 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 RNF180Q86T96 592 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 SMYD4Q8IYR2 804 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-207ENST00000467273 ABRAQ8N0Z2 381 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 TRPV1Q8NER1 839 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 EPHX3Q9H6B9 360 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 SLC28A3Q9HAS3 691 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 CAPN10Q9HC96 672 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 COPRSQ9NQ92 184 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 TMEM39AQ9NV64 488 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 PLAGL2Q9UPG8 496 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 AKAP2Q9Y2D5 859 aa6.65□□□□□ -1.34
PTCD3-207ENST00000467273 ZNF521Q96K83 1311 aa6.65□□□□□ -1.35
PTCD3-207ENST00000467273 PI4K2BG5E9Z4 385 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 SMIM22K7EJ46 135 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 CIAO1O76071 339 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 RARBP10826 455 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 LIG1P18858 919 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 USP14P54578 494 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 CCDC85BQ15834 202 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-207ENST00000467273 ATP2B3Q16720 1220 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 TMEM240Q5SV17 173 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 DTHD1Q6ZMT9 781 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 PRR23BQ6ZRT6 265 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 DPP9Q86TI2 863 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 SIAH1Q8IUQ4 282 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 FOXP4Q8IVH2 680 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-207ENST00000467273 ANKRD44Q8N8A2 993 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 SHCBP1Q8NEM2 672 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 NUP133Q8WUM0 1156 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 SREK1Q8WXA9 508 aaKnown RBP6.64□□□□□ -1.35
PTCD3-207ENST00000467273 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.64□□□□□ -1.351e-13■■■□□ 17.4
PTCD3-207ENST00000467273 TINF2Q9BSI4 451 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 DUSP23Q9BVJ7 150 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms