RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LGALS4P56470 323 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 YBX1P67809 324 aaKnown RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 BIRC2Q13490 618 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 UBE4AQ14139 1066 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 FSCN1Q16658 493 aaKnown RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 UAP1L1Q3KQV9 507 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 PLEKHN1Q494U1 663 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 FYB2Q5VWT5 728 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 RPTNQ6XPR3 784 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 ZSWIM9Q86XI8 627 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 DGKHQ86XP1 1220 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 FAM26EQ8N5C1 309 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 RELTQ969Z4 430 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 ACAP3Q96P50 834 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 RPS6KC1Q96S38 1066 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 KCTD10Q9H3F6 313 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 KCNG1Q9UIX4 513 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 TUBD1Q9UJT1 453 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 PNMA8BQ9ULN7 279 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 RIPOR2Q9Y4F9 1068 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 GOLGA6L22H0YM25 854 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 NDUFS2O75306 463 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 JUNBP17275 347 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-209ENST00000467124 NEK3P51956 506 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 KRT85P78386 507 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 ADCY1Q08828 1119 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 KCNMB1Q16558 191 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 RRP12Q5JTH9 1297 aaKnown RBP5.31□□□□□ -1.56
VPS13A-209ENST00000467124 TTC38Q5R3I4 469 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 XP32Q5T750 250 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 IL31Q6EBC2 164 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 SLFN12LQ6IEE8 588 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 CCSAPQ6IQ19 270 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-209ENST00000467124 TIGD7Q6NT04 549 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-209ENST00000467124 ZC3H14Q6PJT7 736 aaKnown RBP5.31□□□□□ -1.56
VPS13A-209ENST00000467124 TMC5Q6UXY8 1006 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 PHYKPLQ8IUZ5 450 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 FAM126BQ8IXS8 530 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 EXOC8Q8IYI6 725 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 GRAMD1CQ8IYS0 662 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 E2F7Q96AV8 911 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 RNF38Q9H0F5 515 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 BTBD7Q9P203 1132 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 MAGEL2Q9UJ55 1249 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 RCAN3Q9UKA8 241 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 USP18Q9UMW8 372 aa5.31□□□□□ -1.56
VPS13A-209ENST00000467124 NFIBO00712 420 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 PRLP01236 227 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 LRG1P02750 347 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 CELA3BP08861 270 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 HSPA6P17066 643 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 AOAHP28039 575 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 MTNR1BP49286 362 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ADCY2Q08462 1091 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 DBPQ10586 325 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-209ENST00000467124 MOGSQ13724 837 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 NOLC1Q14978 699 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS13A-209ENST00000467124 LLGL1Q15334 1064 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 CD276Q5ZPR3 534 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 LIPIQ6XZB0 460 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ETV3LQ6ZN32 361 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 KCNK18Q7Z418 384 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 STK32CQ86UX6 486 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
VPS13A-209ENST00000467124 AMIGO3Q86WK7 504 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 MIER2Q8N344 545 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 PPP1R35Q8TAP8 253 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 CPA5Q8WXQ8 436 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ALG3Q92685 438 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ORAI2Q96SN7 254 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 GTPBP4Q9BZE4 634 aaKnown RBP5.3□□□□□ -1.56
VPS13A-209ENST00000467124 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 DTLQ9NZJ0 730 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ASB1Q9Y576 335 aa5.3□□□□□ -1.56
VPS13A-209ENST00000467124 ST20-MTHFSA0A0A6YYL1 179 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 A6NNZ2 444 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 APAF1O14727 1248 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 OFD1O75665 1012 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 MPIG6BO95866 241 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 MYL3P08590 195 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 ITGB5P18084 799 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 GLRBP48167 497 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 PPARAQ07869 468 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 GALEQ14376 348 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 COBLL1Q53SF7 1204 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 ZBTB34Q8NCN2 500 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 TOE1Q96GM8 510 aaKnown RBP5.29□□□□□ -1.56
VPS13A-209ENST00000467124 MAML3Q96JK9 1138 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 AMNQ9BXJ7 453 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 CSRNP2Q9H175 543 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 WNT8AQ9H1J5 351 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 IFT122Q9HBG6 1241 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 NMRK2Q9NPI5 230 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 DMRT3Q9NQL9 472 aa5.29□□□□□ -1.56
VPS13A-209ENST00000467124 TMPRSS11EQ9UL52 423 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms