RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
CXXC4-202ENST00000466963 NCDNQ9UBB6 729 aa6.52□□□□□ -1.37
CXXC4-202ENST00000466963 SEC63Q9UGP8 760 aaKnown RBP6.52□□□□□ -1.37
CXXC4-202ENST00000466963 PCDHGA5Q9Y5G8 931 aa6.52□□□□□ -1.37
CXXC4-202ENST00000466963 SOBPA7XYQ1 873 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 UPP2O95045 317 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 CFBP00751 764 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 RETP07949 1114 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 GHRP10912 638 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 ALDH7A1P49419 539 aaKnown RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 VARS2Q5ST30 1063 aaKnown RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SPOUT1Q5T280 376 aaKnown RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 IFIT1BQ5T764 474 aaKnown RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 CABP7Q86V35 215 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SMARCC2Q8TAQ2 1214 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 RUFY2Q8WXA3 655 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SETD4Q9NVD3 440 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 TMEM260Q9NX78 707 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SLC9A2Q9UBY0 812 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 PHLPP2Q6ZVD8 1323 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 A0A0U1RQF3 1178 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 FGAP02671 866 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 KCNA2P16389 499 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 TCF7P36402 384 aaPredicted RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 POU5F1BQ06416 359 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 ELAVL2Q12926 359 aaKnown RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 MTHFD1LQ6UB35 978 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SUMF1Q8NBK3 374 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 CYP2W1Q8TAV3 490 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 WNT8BQ93098 351 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 JPH1Q9HDC5 661 aaPredicted RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 COL20A1Q9P218 1284 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 BARX2Q9UMQ3 279 aaPredicted RBP6.51□□□□□ -1.37
CXXC4-202ENST00000466963 SALL3Q9BXA9 1300 aa6.51□□□□□ -1.37
CXXC4-202ENST00000466963 TBKBP1A7MCY6 615 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 KLRF2D3W0D1 207 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 H0Y858 1186 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 LINC01565O15544 149 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 PRDM1O75626 825 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 MYCLP12524 364 aaPredicted RBP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 NPR3P17342 541 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 SFNP31947 248 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 RMDN1Q96DB5 314 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 NRBP2Q9NSY0 501 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CLUHO75153 1309 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 LAMTOR5O43504 91 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CYP3A4P08684 503 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 SFPQP23246 707 aaKnown RBP eCLIP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 PDE4AP27815 886 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 SLC16A2P36021 539 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 EVX2Q03828 476 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 ACAP1Q15027 740 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 LETM2Q2VYF4 491 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 TMC7Q7Z402 723 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CATIPQ7Z7H3 387 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 ADGRD2Q7Z7M1 963 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 SIRT2Q8IXJ6 389 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 KIAA1958Q8N8K9 716 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 KDF1Q8NAX2 398 aaPredicted RBP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 KCNG4Q8TDN1 519 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CCDC12Q8WUD4 166 aaPredicted RBP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 ATRIPQ8WXE1 791 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 LINC01599Q8WXQ3 324 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CASD1Q96PB1 797 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 RXFP3Q9NSD7 469 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 ASAP2O43150 1006 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 PROS1P07225 676 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 STAT5BP51692 787 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 LRRC32Q14392 662 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 CSRP2Q16527 193 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 ECHDC2Q86YB7 292 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 NAP1L4Q99733 375 aaKnown RBP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 RBM28Q9NW13 759 aaKnown RBP6.5□□□□□ -1.37
CXXC4-202ENST00000466963 DLGAP2Q9P1A6 1054 aa6.5□□□□□ -1.37
CXXC4-202ENST00000466963 FRMPD2Q68DX3 1309 aaPredicted RBP6.49□□□□□ -1.37
CXXC4-202ENST00000466963 GSTTP1A0A1W2PQM5 241 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 SPDYE3A6NKU9 549 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 ECI2O75521 394 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 BRD1O95696 1058 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 FGF19O95750 216 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 WEE1P30291 646 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 CD52P31358 61 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 DNM2P50570 870 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 CCR3P51677 355 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 RSPO4Q2I0M5 234 aaPredicted RBP6.49□□□□□ -1.37
CXXC4-202ENST00000466963 USH1GQ495M9 461 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 MARCH8Q5T0T0 291 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 MRPL10Q7Z7H8 261 aaKnown RBP6.49□□□□□ -1.37
CXXC4-202ENST00000466963 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
CXXC4-202ENST00000466963 PJA1Q8NG27 643 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 TMEM87BQ96K49 555 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 PHOX2BQ99453 314 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 GPR88Q9GZN0 384 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 POMKQ9H5K3 350 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms