RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 GYS2P54840 703 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 MAP3K12Q12852 859 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS13D-203ENST00000466732 PCOLCEQ15113 449 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 TBR1Q16650 682 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 TTC38Q5R3I4 469 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 SLFN12LQ6IEE8 588 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 SDE2Q6IQ49 451 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 CIR1Q86X95 450 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-203ENST00000466732 NME9Q86XW9 330 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 RTKN2Q8IZC4 609 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 BCL6BQ8N143 479 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-203ENST00000466732 TUBGCP5Q96RT8 1024 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 LMF1Q96S06 567 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 KIAA1683Q9H0B3 1180 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
VPS13D-203ENST00000466732 PDE8AO60658 829 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 MYCLP1P12525 358 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-203ENST00000466732 MAGEA10P43363 369 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-203ENST00000466732 SCNN1BP51168 640 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 ADCY1Q08828 1119 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 AGBL4Q5VU57 503 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 PRAMEF9Q5VWM5 478 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 TTC9BQ8N6N2 239 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 EFHBQ8N7U6 833 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 SMC1BQ8NDV3 1235 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 NEIL1Q96FI4 390 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-203ENST00000466732 LRRC37BQ96QE4 947 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
VPS13D-203ENST00000466732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-203ENST00000466732 ARHGAP6O43182 974 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 TGM5O43548 720 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 HSD3B2P26439 372 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 MRE11P49959 708 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 MEOX1P50221 254 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 KPNA1P52294 538 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-203ENST00000466732 KRTAP10-2P60368 255 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 RAC3P60763 192 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 NFKB2Q00653 900 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 NFYCQ13952 458 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 ICAM4Q14773 271 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 MYBPC3Q14896 1274 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 SART3Q15020 963 aaKnown RBP5.62□□□□□ -1.51
VPS13D-203ENST00000466732 TAF7LQ5H9L4 462 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 USP30Q70CQ3 517 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 PASD1Q8IV76 773 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 ZZZ3Q8IYH5 903 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 DNERQ8NFT8 737 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 OR2W6PQ8NHA6 318 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 LEO1Q8WVC0 666 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-203ENST00000466732 RTF1Q92541 710 aaKnown RBP5.62□□□□□ -1.51
VPS13D-203ENST00000466732 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 GPR101Q96P66 508 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-203ENST00000466732 GNRHR2Q96P88 292 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 ST6GALNAC2Q9UJ37 374 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 MAGEL2Q9UJ55 1249 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 NR2E1Q9Y466 385 aa5.62□□□□□ -1.51
VPS13D-203ENST00000466732 MATN2O00339 956 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 ADRB1P08588 477 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 ANTXR2P58335 489 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 ADAM17P78536 824 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 SMAD3P84022 425 aaKnown RBP5.61□□□□□ -1.51
VPS13D-203ENST00000466732 LRRC32Q14392 662 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 TAX1BP1Q86VP1 789 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 PHYKPLQ8IUZ5 450 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 C7orf31Q8N865 590 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 CHST13Q8NET6 341 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 OR5AN1Q8NGI8 311 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 OR10A2Q9H208 303 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 SPTLC3Q9NUV7 552 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 SAE1Q9UBE0 346 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-203ENST00000466732 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
VPS13D-203ENST00000466732 PATE3B3GLJ2 98 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 PRPF6O94906 941 aaKnown RBP5.6□□□□□ -1.51
VPS13D-203ENST00000466732 CD40P25942 277 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 ADCYAP1R1P41586 468 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 LSSP48449 732 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 IL2P60568 153 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 OCRLQ01968 901 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 DGKDQ16760 1214 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 TCTN3Q6NUS6 607 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 KANSL1Q7Z3B3 1105 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 THNSL2Q86YJ6 484 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 CFHR4Q92496 578 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
VPS13D-203ENST00000466732 DPYSL5Q9BPU6 564 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 MYL10Q9BUA6 226 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-203ENST00000466732 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 CD248Q9HCU0 757 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 KCMF1Q9P0J7 381 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 VWA7Q9Y334 891 aa5.6□□□□□ -1.51
VPS13D-203ENST00000466732 FOXS1O43638 330 aa5.59□□□□□ -1.51
VPS13D-203ENST00000466732 IGSF3O75054 1194 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms