RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GTF2F1P35269 517 aaKnown RBP eCLIP21.65■■□□□ 1.06
COL9A3-206ENST00000466532 CLCN3P51790 818 aa21.65■■□□□ 1.06
COL9A3-206ENST00000466532 SSRP1Q08945 709 aaKnown RBP21.65■■□□□ 1.06
COL9A3-206ENST00000466532 SLC24A5Q71RS6 500 aa21.65■■□□□ 1.06
COL9A3-206ENST00000466532 FAM228AQ86W67 206 aa21.65■■□□□ 1.06
COL9A3-206ENST00000466532 SPPL3Q8TCT6 385 aa21.65■■□□□ 1.06
COL9A3-206ENST00000466532 DISC1Q9NRI5 854 aa21.65■■□□□ 1.06
COL9A3-206ENST00000466532 C9IYK1 514 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 CPLX1O14810 134 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 CHMP2AO43633 222 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 GAS7O60861 476 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 GPR32O75388 356 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 OATP04181 439 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 DLX2Q07687 328 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-206ENST00000466532 CLUL1Q15846 466 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 SPOUT1Q5T280 376 aaKnown RBP21.64■■□□□ 1.05
COL9A3-206ENST00000466532 LRCH2Q5VUJ6 765 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 EFCAB12Q6NXP0 572 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 TBCKQ8TEA7 893 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 POF1BQ8WVV4 589 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 SLC5A5Q92911 643 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 PPP2R3CQ969Q6 453 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 MAP7D2Q96T17 732 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 RIT2Q99578 217 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 LARP6Q9BRS8 491 aaKnown RBP21.64■■□□□ 1.05
COL9A3-206ENST00000466532 TEKT3Q9BXF9 490 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 NRBP2Q9NSY0 501 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 PCDHA4Q9UN74 947 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 AKT3Q9Y243 479 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 C5orf42Q9H799 3197 aa21.64■■□□□ 1.05
COL9A3-206ENST00000466532 FAM86C2PA6NEL3 165 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 TBKBP1A7MCY6 615 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 ZNF862O60290 1169 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 DEXIO95424 95 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 TMOD1P28289 359 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 SFNP31947 248 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 PRKCEQ02156 737 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 FAM102BQ5T8I3 360 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 LRRC71Q8N4P6 559 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 GJA10Q969M2 543 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 ZNF274Q96GC6 653 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-206ENST00000466532 C22orf23Q9BZE7 217 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 UNC45AQ9H3U1 944 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 C11orf16Q9NQ32 467 aa21.63■■□□□ 1.05
COL9A3-206ENST00000466532 LINC01565O15544 149 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 GPR37L1O60883 481 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 TBX10O75333 385 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 IRS1P35568 1242 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 JAK3P52333 1124 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 NLRP11P59045 1033 aaKnown RBP21.62■■□□□ 1.05
COL9A3-206ENST00000466532 UGCGQ16739 394 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 LINC01465Q8N7H1 131 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 UPF3BQ9BZI7 483 aaKnown RBP21.62■■□□□ 1.05
COL9A3-206ENST00000466532 TM6SF1Q9BZW5 370 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 PRKAG3Q9UGI9 489 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 PCDHB12Q9Y5F1 795 aa21.62■■□□□ 1.05
COL9A3-206ENST00000466532 MBTPS2O43462 519 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 ZP2Q05996 745 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 STK3Q13188 491 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 ADAM15Q13444 863 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 DSC3Q14574 896 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 Q4G0T1 1027 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 CPLX2Q6PUV4 134 aaKnown RBP21.61■■□□□ 1.05
COL9A3-206ENST00000466532 ADGRD2Q7Z7M1 963 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 BLIDQ8IZY5 108 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 ATP6V0A4Q9HBG4 840 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 AAASQ9NRG9 546 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 TMEM161AQ9NX61 479 aa21.61■■□□□ 1.05
COL9A3-206ENST00000466532 TDP2O95551 362 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 FGFR1P11362 822 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 NDUFV1P49821 464 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 FAM189BP81408 668 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 MIER3Q7Z3K6 550 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 ADHFE1Q8IWW8 467 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 ZNF668Q96K58 619 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-206ENST00000466532 ADAMTS10Q9H324 1103 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 ELAC1Q9H777 363 aaKnown RBP21.6■■□□□ 1.05
COL9A3-206ENST00000466532 HCSTQ9UBK5 93 aa21.6■■□□□ 1.05
COL9A3-206ENST00000466532 M0R2N6 131 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 PSMD10O75832 226 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 ALADP13716 330 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 EIF4BP23588 611 aaKnown RBP21.59■■□□□ 1.05
COL9A3-206ENST00000466532 NRIP1P48552 1158 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 TBC1D8BQ0IIM8 1120 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 SMAD4Q13485 552 aaKnown RBP21.59■■□□□ 1.05
COL9A3-206ENST00000466532 SMAD2Q15796 467 aaKnown RBP21.59■■□□□ 1.05
COL9A3-206ENST00000466532 ZNF710Q8N1W2 664 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 DAGLBQ8NCG7 672 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 RDM1Q8NG50 284 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 SCLT1Q96NL6 688 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 AIFM3Q96NN9 605 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 PDRG1Q9NUG6 133 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 TYW1Q9NV66 732 aaKnown RBP21.59■■□□□ 1.05
COL9A3-206ENST00000466532 CD207Q9UJ71 328 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 HCN4Q9Y3Q4 1203 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 PCDHGC5Q9Y5F6 944 aa21.59■■□□□ 1.05
COL9A3-206ENST00000466532 ARID2Q68CP9 1835 aa21.58■■□□□ 1.05
COL9A3-206ENST00000466532 CYP3A7-CYP3A51PA0A087WV96 503 aa21.58■■□□□ 1.05
COL9A3-206ENST00000466532 ZSCAN20P17040 1043 aaPredicted RBP21.58■■□□□ 1.05
COL9A3-206ENST00000466532 CYP3A7P24462 503 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms