RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 KHSRPQ92945 711 aaKnown RBP eCLIP19.56■□□□□ 0.72
CPSF4-209ENST00000465132 COL4A6Q14031 1691 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 WDR64B1ANS9 1081 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 H3BNC9 293 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 CHRNA1P02708 482 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
CPSF4-209ENST00000465132 TXKP42681 527 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 GPM6BQ13491 265 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 PDIA5Q14554 519 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 MIS18BP1Q6P0N0 1132 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 TAF2Q6P1X5 1199 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.55■□□□□ 0.72
CPSF4-209ENST00000465132 SEPT1Q8WYJ6 367 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 MTMR9Q96QG7 549 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 LRFN3Q9BTN0 628 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 AZI2Q9H6S1 392 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 DOCK5Q9H7D0 1870 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 TTC12Q9H892 705 aaPredicted RBP19.55■□□□□ 0.72
CPSF4-209ENST00000465132 CD320Q9NPF0 282 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 BRWD1Q9NSI6 2320 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 ZDHHC9Q9Y397 364 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 SAMM50Q9Y512 469 aa19.55■□□□□ 0.72
CPSF4-209ENST00000465132 GSTTP1A0A1W2PQM5 241 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 PLA2G5P39877 138 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 NASPP49321 788 aaPredicted RBP19.54■□□□□ 0.72
CPSF4-209ENST00000465132 PPFIA1Q13136 1202 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 SLC39A14Q15043 492 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 TIGD5Q53EQ6 642 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 AK8Q96MA6 479 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 ERAP1Q9NZ08 941 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 PKD2L1Q9P0L9 805 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 PCDHA10Q9Y5I2 948 aa19.54■□□□□ 0.72
CPSF4-209ENST00000465132 EDIL3O43854 480 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 PSMD10O75832 226 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 PSAPP07602 524 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 GHRP10912 638 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 FXR2P51116 673 aaKnown RBP eCLIP19.53■□□□□ 0.72
CPSF4-209ENST00000465132 MGAT3Q09327 533 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 ITGB3BPQ13352 177 aaPredicted RBP19.53■□□□□ 0.72
CPSF4-209ENST00000465132 PPP2R5CQ13362 524 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 TMEM31Q5JXX7 168 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 FAM160B1Q5W0V3 765 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 BANK1Q8NDB2 785 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 NEK9Q8TD19 979 aa19.53■□□□□ 0.72
CPSF4-209ENST00000465132 MBLAC1A4D2B0 266 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-209ENST00000465132 SPTLC2O15270 562 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 DHX15O43143 795 aaKnown RBP19.52■□□□□ 0.72
CPSF4-209ENST00000465132 PPP6R2O75170 966 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 MARK3P27448 753 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 LONP1P36776 959 aaKnown RBP19.52■□□□□ 0.72
CPSF4-209ENST00000465132 SLC26A2P50443 739 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
CPSF4-209ENST00000465132 LPIN1Q14693 890 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 GRIK4Q16099 956 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 MARCH8Q5T0T0 291 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 HAUS3Q68CZ6 603 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 PTCRAQ6ISU1 281 aaPredicted RBP19.52■□□□□ 0.72
CPSF4-209ENST00000465132 MIER3Q7Z3K6 550 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 FAM178BQ8IXR5 827 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 HAS1Q92839 578 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 GLG1Q92896 1179 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 FAM122AQ96E09 287 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 USP28Q96RU2 1077 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 SMARCAD1Q9H4L7 1026 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 TUBE1Q9UJT0 475 aa19.52■□□□□ 0.72
CPSF4-209ENST00000465132 SLC26A4O43511 780 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 TXLNAP40222 546 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 ACTR2P61160 394 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 DNM1Q05193 864 aaKnown RBP19.51■□□□□ 0.71
CPSF4-209ENST00000465132 NBR1Q14596 966 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 TCEAL5Q5H9L2 206 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 FAM173BQ6P4H8 233 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 GJD3Q8N144 294 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 FIBCD1Q8N539 461 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 KCTD17Q8N5Z5 321 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 C4orf32Q8N8J7 132 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 KRI1Q8N9T8 703 aaKnown RBP19.51■□□□□ 0.71
CPSF4-209ENST00000465132 LINC00301Q8NCQ3 95 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 C11orf16Q9NQ32 467 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 DISC1Q9NRI5 854 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 LRWD1Q9UFC0 647 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
CPSF4-209ENST00000465132 GRXCR2A6NFK2 248 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 PI4K2BG5E9Z4 385 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 DDX39AO00148 427 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 ENPP3O14638 875 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 BACH1O14867 736 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 GPR37L1O60883 481 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 IL9P15248 144 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 TECP42680 631 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 COL19A1Q14993 1142 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 PUS10Q3MIT2 529 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 FOXD4L6Q3SYB3 417 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 FBXO47Q5MNV8 452 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 KRT79Q5XKE5 535 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 FOXD4L3Q6VB84 417 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 DNAJB3Q8WWF6 145 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms