RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ENTPD7Q9NQZ7 604 aa10.97□□□□□ -0.65
APP-213ENST00000464867 CYP26B1Q9NR63 512 aa10.97□□□□□ -0.65
APP-213ENST00000464867 DBR1Q9UK59 544 aaKnown RBP10.97□□□□□ -0.65
APP-213ENST00000464867 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
APP-213ENST00000464867 WDR19Q8NEZ3 1342 aa10.97□□□□□ -0.65
APP-213ENST00000464867 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.65
APP-213ENST00000464867 NOP56O00567 594 aaKnown RBP10.96□□□□□ -0.65
APP-213ENST00000464867 SORBS3O60504 671 aa10.96□□□□□ -0.65
APP-213ENST00000464867 FGF18O76093 207 aa10.96□□□□□ -0.65
APP-213ENST00000464867 CHRNA1P02708 482 aa10.96□□□□□ -0.65
APP-213ENST00000464867 CHGBP05060 677 aa10.96□□□□□ -0.65
APP-213ENST00000464867 ATP5JP18859 108 aa10.96□□□□□ -0.65
APP-213ENST00000464867 HOXC8P31273 242 aa10.96□□□□□ -0.65
APP-213ENST00000464867 ERVFC1P60507 584 aa10.96□□□□□ -0.65
APP-213ENST00000464867 ARHGAP4P98171 946 aa10.96□□□□□ -0.65
APP-213ENST00000464867 TBC1D8BQ0IIM8 1120 aa10.96□□□□□ -0.65
APP-213ENST00000464867 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
APP-213ENST00000464867 KCNC3Q14003 757 aa10.96□□□□□ -0.65
APP-213ENST00000464867 COL9A3Q14050 684 aaPredicted RBP10.96□□□□□ -0.65
APP-213ENST00000464867 CELF3Q5SZQ8 465 aaKnown RBP10.96□□□□□ -0.65
APP-213ENST00000464867 PLPP4Q5VZY2 271 aa10.96□□□□□ -0.65
APP-213ENST00000464867 MCF2L2Q86YR7 1114 aa10.96□□□□□ -0.65
APP-213ENST00000464867 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.65
APP-213ENST00000464867 FAM174AQ8TBP5 190 aa10.96□□□□□ -0.65
APP-213ENST00000464867 KIF1BPQ96EK5 621 aa10.96□□□□□ -0.65
APP-213ENST00000464867 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
APP-213ENST00000464867 NGRNQ9NPE2 291 aaKnown RBP10.96□□□□□ -0.65
APP-213ENST00000464867 SETD4Q9NVD3 440 aa10.96□□□□□ -0.65
APP-213ENST00000464867 GPR179Q6PRD1 2367 aa10.95□□□□□ -0.66
APP-213ENST00000464867 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
APP-213ENST00000464867 GGPS1O95749 300 aa10.95□□□□□ -0.66
APP-213ENST00000464867 SP9P0CG40 484 aa10.95□□□□□ -0.66
APP-213ENST00000464867 EIF2AK2P19525 551 aaKnown RBP10.95□□□□□ -0.66
APP-213ENST00000464867 LPIN1Q14693 890 aa10.95□□□□□ -0.66
APP-213ENST00000464867 TAF2Q6P1X5 1199 aa10.95□□□□□ -0.66
APP-213ENST00000464867 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
APP-213ENST00000464867 RASGRP2Q7LDG7 609 aa10.95□□□□□ -0.66
APP-213ENST00000464867 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
APP-213ENST00000464867 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
APP-213ENST00000464867 CDK15Q96Q40 435 aa10.95□□□□□ -0.66
APP-213ENST00000464867 TCF25Q9BQ70 676 aa10.95□□□□□ -0.66
APP-213ENST00000464867 EHMT1Q9H9B1 1298 aa10.95□□□□□ -0.66
APP-213ENST00000464867 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
APP-213ENST00000464867 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
APP-213ENST00000464867 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
APP-213ENST00000464867 ADH1CP00326 375 aa10.94□□□□□ -0.66
APP-213ENST00000464867 LGALS2P05162 132 aa10.94□□□□□ -0.66
APP-213ENST00000464867 NR3C2P08235 984 aa10.94□□□□□ -0.66
APP-213ENST00000464867 TGFB3P10600 412 aa10.94□□□□□ -0.66
APP-213ENST00000464867 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
APP-213ENST00000464867 PPM1JQ5JR12 505 aa10.94□□□□□ -0.66
APP-213ENST00000464867 SPECC1Q5M775 1068 aa10.94□□□□□ -0.66
APP-213ENST00000464867 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
APP-213ENST00000464867 XRRA1Q6P2D8 792 aa10.94□□□□□ -0.66
APP-213ENST00000464867 C1orf210Q8IVY1 113 aa10.94□□□□□ -0.66
APP-213ENST00000464867 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
APP-213ENST00000464867 SUMF1Q8NBK3 374 aa10.94□□□□□ -0.66
APP-213ENST00000464867 TMEM87AQ8NBN3 555 aa10.94□□□□□ -0.66
APP-213ENST00000464867 GPR20Q99678 358 aa10.94□□□□□ -0.66
APP-213ENST00000464867 KLF16Q9BXK1 252 aaPredicted RBP10.94□□□□□ -0.66
APP-213ENST00000464867 DUSP12Q9UNI6 340 aa10.94□□□□□ -0.66
APP-213ENST00000464867 LZTS1Q9Y250 596 aa10.94□□□□□ -0.66
APP-213ENST00000464867 ABCB11O95342 1321 aa10.93□□□□□ -0.66
APP-213ENST00000464867 NRCAMQ92823 1304 aa10.93□□□□□ -0.66
APP-213ENST00000464867 FSCN2O14926 492 aa10.93□□□□□ -0.66
APP-213ENST00000464867 GPAA1O43292 621 aa10.93□□□□□ -0.66
APP-213ENST00000464867 RANBP6O60518 1105 aaKnown RBP10.93□□□□□ -0.66
APP-213ENST00000464867 NMT2O60551 498 aa10.93□□□□□ -0.66
APP-213ENST00000464867 WFS1O76024 890 aa10.93□□□□□ -0.66
APP-213ENST00000464867 EOMESO95936 686 aa10.93□□□□□ -0.66
APP-213ENST00000464867 HSPD1P10809 573 aaKnown RBP10.93□□□□□ -0.66
APP-213ENST00000464867 SCG2P13521 617 aa10.93□□□□□ -0.66
APP-213ENST00000464867 KRT17Q04695 432 aa10.93□□□□□ -0.66
APP-213ENST00000464867 PPARAQ07869 468 aa10.93□□□□□ -0.66
APP-213ENST00000464867 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
APP-213ENST00000464867 AGERQ15109 404 aa10.93□□□□□ -0.66
APP-213ENST00000464867 NONOQ15233 471 aaKnown RBP eCLIP10.93□□□□□ -0.66
APP-213ENST00000464867 FBXO47Q5MNV8 452 aa10.93□□□□□ -0.66
APP-213ENST00000464867 OTOP3Q7RTS5 596 aa10.93□□□□□ -0.66
APP-213ENST00000464867 TMC7Q7Z402 723 aa10.93□□□□□ -0.66
APP-213ENST00000464867 APPBP2Q92624 585 aa10.93□□□□□ -0.66
APP-213ENST00000464867 NAPBQ9H115 298 aa10.93□□□□□ -0.66
APP-213ENST00000464867 EPB41L4AQ9HCS5 686 aaPredicted RBP10.93□□□□□ -0.66
APP-213ENST00000464867 IL17RBQ9NRM6 502 aa10.93□□□□□ -0.66
APP-213ENST00000464867 WNT16Q9UBV4 365 aa10.93□□□□□ -0.66
APP-213ENST00000464867 CDH22Q9UJ99 828 aa10.93□□□□□ -0.66
APP-213ENST00000464867 ANGPTL2Q9UKU9 493 aa10.93□□□□□ -0.66
APP-213ENST00000464867 USP18Q9UMW8 372 aa10.93□□□□□ -0.66
APP-213ENST00000464867 TNNQ9UQP3 1299 aa10.93□□□□□ -0.66
APP-213ENST00000464867 PCDHB7Q9Y5E2 793 aa10.93□□□□□ -0.66
APP-213ENST00000464867 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
APP-213ENST00000464867 RPLP2P05387 115 aaKnown RBP10.92□□□□□ -0.66
APP-213ENST00000464867 WEE2P0C1S8 567 aa10.92□□□□□ -0.66
APP-213ENST00000464867 TOP1P11387 765 aaKnown RBP10.92□□□□□ -0.66
APP-213ENST00000464867 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
APP-213ENST00000464867 TIMP2P16035 220 aa10.92□□□□□ -0.66
APP-213ENST00000464867 IBSPP21815 317 aaPredicted RBP10.92□□□□□ -0.66
APP-213ENST00000464867 APOBRQ0VD83 1088 aa10.92□□□□□ -0.66
APP-213ENST00000464867 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
APP-213ENST00000464867 RARS2Q5T160 578 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms