RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 LYPLA2O95372 231 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 SPATA31C1P0DKV0 1188 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 RPA1P27694 616 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 RFC5P40937 340 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 GPNMBQ14956 572 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 ZRSR1Q15695 479 aaKnown RBP13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 IL17AQ16552 155 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 KIZQ2M2Z5 673 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 LRIT3Q3SXY7 679 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 TSHZ1Q6ZSZ6 1077 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 PIGOQ8TEQ8 1089 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 VWCEQ96DN2 955 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 NACC1Q96RE7 527 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 ANKEF1Q9NU02 776 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 CXXC1Q9P0U4 656 aaPredicted RBP13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 CLIC4Q9Y696 253 aa13.43□□□□□ -0.26
RPUSD3-211ENST00000464783 A0A087WWV3 80 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 EFCAB14O75071 495 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 F13A1P00488 732 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 PAK2Q13177 524 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 LPIN1Q14693 890 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 EMC2Q15006 297 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 USP38Q8NB14 1042 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 APBB2Q92870 758 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 OSMRQ99650 979 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 MTRQ99707 1265 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
RPUSD3-211ENST00000464783 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 ABHD14A-ACY1A0A1B0GW23 586 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 ARHGEF35A5YM69 484 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 GAS2O43903 313 aaKnown RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 DGAT1O75907 488 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 XRCC6P12956 609 aaKnown RBP eCLIP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 MUTP22033 750 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 CDC25AP30304 524 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 CD52P31358 61 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 RARRES1P49788 294 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 DRP2Q13474 957 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 PKP1Q13835 747 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 STK38Q15208 465 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 RASIP1Q5U651 963 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 RHPN2Q8IUC4 686 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 LINC01465Q8N7H1 131 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 RASSF8Q8NHQ8 419 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 TCP11Q8WWU5 503 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 AK8Q96MA6 479 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 USP28Q96RU2 1077 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 DHX33Q9H6R0 707 aaKnown RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 ATP6V0A4Q9HBG4 840 aa13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 DBR1Q9UK59 544 aaKnown RBP13.41□□□□□ -0.26
RPUSD3-211ENST00000464783 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 USO1O60763 962 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 ATP2A2P16615 1042 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 MARCKSP29966 332 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 LONP1P36776 959 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 UBA7P41226 1012 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 GPC3P51654 580 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 WDR5P61964 334 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 CDC42EP1Q00587 391 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 NFX1Q12986 1120 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 ODR4Q5SWX8 454 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 PSPC1Q8WXF1 523 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 TMEM143Q96AN5 459 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
RPUSD3-211ENST00000464783 MYH11P35749 1972 aa13.4□□□□□ -0.27
RPUSD3-211ENST00000464783 SOX1O00570 391 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 GPR182O15218 404 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 GPR32O75388 356 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 AMHP03971 560 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms