RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 AKT3Q9Y243 479 aa29.14■■■□□ 2.26
U2AF1-206ENST00000464750 LINC00271P0C7V0 271 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 STAG3L1P0CL83 205 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 FDPSP14324 419 aaKnown RBP29.13■■■□□ 2.25
U2AF1-206ENST00000464750 PTPROQ16827 1216 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 ODR4Q5SWX8 454 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 EFCAB12Q6NXP0 572 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 CRIPAKQ8N1N5 446 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 SEPT9Q9UHD8 586 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-206ENST00000464750 RWDD3Q9Y3V2 267 aa29.13■■■□□ 2.25
U2AF1-206ENST00000464750 MGEA5O60502 916 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 GPR32O75388 356 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 GCFC2P16383 781 aaKnown RBP29.12■■■□□ 2.25
U2AF1-206ENST00000464750 IBSPP21815 317 aaPredicted RBP29.12■■■□□ 2.25
U2AF1-206ENST00000464750 TMOD1P28289 359 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 KCNQ1P51787 676 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 FAM228AQ86W67 206 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 NSUN7Q8NE18 718 aaKnown RBP29.12■■■□□ 2.25
U2AF1-206ENST00000464750 ST3GAL5Q9UNP4 418 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 NCOR1O75376 2440 aa29.12■■■□□ 2.25
U2AF1-206ENST00000464750 GPR182O15218 404 aa29.11■■■□□ 2.25
U2AF1-206ENST00000464750 PPP4R3AQ6IN85 833 aa29.11■■■□□ 2.25
U2AF1-206ENST00000464750 CMTR2Q8IYT2 770 aaKnown RBP29.11■■■□□ 2.25
U2AF1-206ENST00000464750 CLP1Q92989 425 aaKnown RBP29.11■■■□□ 2.25
U2AF1-206ENST00000464750 KCNMB3Q9NPA1 279 aa29.11■■■□□ 2.25
U2AF1-206ENST00000464750 LRFN2Q9ULH4 789 aa29.11■■■□□ 2.25
U2AF1-206ENST00000464750 FNDC1Q4ZHG4 1894 aaPredicted RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 C5orf67F2Z3F1 127 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 CCNT1O60563 726 aaKnown RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 KRT2P35908 639 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 BMPR1AP36894 532 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 SARSP49591 514 aaKnown RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 TBC1D8BQ0IIM8 1120 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 TIGD5Q53EQ6 642 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 XKR3Q5GH77 459 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 EARS2Q5JPH6 523 aaKnown RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 FAM43BQ6ZT52 329 aaPredicted RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 UHRF1Q96T88 793 aaPredicted RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 NAP1L4Q99733 375 aaKnown RBP29.1■■■□□ 2.25
U2AF1-206ENST00000464750 BRMS1Q9HCU9 246 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 VAV3Q9UKW4 847 aa29.1■■■□□ 2.25
U2AF1-206ENST00000464750 MYO7AQ13402 2215 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 DENND3A2RUS2 1198 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 JAK2O60674 1132 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 RB1P06400 928 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 NLRP11P59045 1033 aaKnown RBP29.09■■■□□ 2.25
U2AF1-206ENST00000464750 NR5A1Q13285 461 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 TARBP2Q15633 366 aaKnown RBP29.09■■■□□ 2.25
U2AF1-206ENST00000464750 MTERF2Q49AM1 385 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 PAN2Q504Q3 1202 aaKnown RBP29.09■■■□□ 2.25
U2AF1-206ENST00000464750 BANK1Q8NDB2 785 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 FAM20AQ96MK3 541 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 ADAM2Q99965 735 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 C11orf84Q9BUA3 381 aaPredicted RBP29.09■■■□□ 2.25
U2AF1-206ENST00000464750 C1orf112Q9NSG2 853 aa29.09■■■□□ 2.25
U2AF1-206ENST00000464750 MRPL42Q9Y6G3 142 aaKnown RBP29.09■■■□□ 2.25
U2AF1-206ENST00000464750 TMEM150BA6NC51 233 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 FAM205CA6NFA0 338 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 BMP1P13497 986 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 GATMP50440 423 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 PPP2R5CQ13362 524 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 NIFKQ9BYG3 293 aaKnown RBP29.08■■■□□ 2.25
U2AF1-206ENST00000464750 ADAMTS10Q9H324 1103 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 RGS18Q9NS28 235 aa29.08■■■□□ 2.25
U2AF1-206ENST00000464750 TNFRSF10AO00220 468 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 EML1O00423 815 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 STBD1O95210 358 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 FOSBP53539 338 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 MUC3AQ02505 3323 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 ST3GAL1Q11201 340 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 POTEDQ86YR6 584 aa29.07■■■□□ 2.24
U2AF1-206ENST00000464750 ZNF668Q96K58 619 aaPredicted RBP29.07■■■□□ 2.24
U2AF1-206ENST00000464750 GPC3P51654 580 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 PSMC5P62195 406 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 SLC24A5Q71RS6 500 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 ZNF710Q8N1W2 664 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 TNFRSF25Q93038 417 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 SCLT1Q96NL6 688 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 SH2D3AQ9BRG2 576 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 UBE2ZQ9H832 354 aaPredicted RBP29.06■■■□□ 2.24
U2AF1-206ENST00000464750 PCDHB7Q9Y5E2 793 aa29.06■■■□□ 2.24
U2AF1-206ENST00000464750 C9IYK1 514 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 TBX3O15119 743 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 MARCH6O60337 910 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 HAS1Q92839 578 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 NECAB3Q96P71 396 aaPredicted RBP29.05■■■□□ 2.24
U2AF1-206ENST00000464750 CEP89Q96ST8 783 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 PLVAPQ9BX97 442 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 LMAN2LQ9H0V9 348 aa29.05■■■□□ 2.24
U2AF1-206ENST00000464750 DDX11L8A8MPP1 907 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 GRM6O15303 877 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 MMP1P03956 469 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 EIF4BP23588 611 aaKnown RBP29.04■■■□□ 2.24
U2AF1-206ENST00000464750 DRP2Q13474 957 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 TRIM29Q14134 588 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 DSC3Q14574 896 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 NSUN3Q9H649 340 aaKnown RBP29.04■■■□□ 2.24
U2AF1-206ENST00000464750 RNF216Q9NWF9 866 aaPredicted RBP29.04■■■□□ 2.24
U2AF1-206ENST00000464750 ARID2Q68CP9 1835 aa29.04■■■□□ 2.24
U2AF1-206ENST00000464750 QARSP47897 775 aaKnown RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms