RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 UBXN4Q92575 508 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 LARP4BQ92615 738 aaKnown RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 PNMA5Q96PV4 448 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 PDCD2LQ9BRP1 358 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 WDR11Q9BZH6 1224 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 PSTPIP2Q9H939 334 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 TMEM260Q9NX78 707 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 PHF24Q9UPV7 400 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 LCTP09848 1927 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 A0A1W2PQJ5 194 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 TRIM49BA6NDI0 452 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 MOXD2PA6NHM9 499 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 NKRFO15226 690 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 KIF5CO60282 957 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 EVI5O60447 810 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 FGFR1OPO95684 399 aaKnown RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 EIF2AK2P19525 551 aaKnown RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 KRT9P35527 623 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 CDK17Q00537 523 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 KCNA10Q16322 511 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 MEA1Q16626 185 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 GUF1Q8N442 669 aaKnown RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 CSGALNACT2Q8N6G5 542 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 PCSK9Q8NBP7 692 aaKnown RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 OR8K1Q8NGG5 319 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 ERGIC2Q96RQ1 377 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 DESI2Q9BSY9 194 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 TTYH3Q9C0H2 523 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 ARGLU1Q9NWB6 273 aaPredicted RBP10.95□□□□□ -0.66
PTPRD-207ENST00000463477 NR2E3Q9Y5X4 410 aa10.95□□□□□ -0.66
PTPRD-207ENST00000463477 KDM3AQ9Y4C1 1321 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 ATP8B1O43520 1251 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 SLC37A4O43826 429 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 MYCNP04198 464 aaPredicted RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 C6orf222P0C671 652 aaPredicted RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CYP3A7P24462 503 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 TXKP42681 527 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 USP11P51784 963 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 EHHADHQ08426 723 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 STK4Q13043 487 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 TTLL4Q14679 1199 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 PGM5Q15124 567 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 TMEM63BQ5T3F8 832 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CCDC62Q6P9F0 684 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 SLC39A5Q6ZMH5 540 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 RSRC2Q7L4I2 434 aaKnown RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 TLK2Q86UE8 772 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CPLX3Q8WVH0 158 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 RAD54LQ92698 747 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CDK5RAP3Q96JB5 506 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 TUBGCP2Q9BSJ2 902 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 CARD6Q9BX69 1037 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 NT5C3AQ9H0P0 336 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 MAPK8IP1Q9UQF2 711 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 LUC7L2Q9Y383 392 aaKnown RBP10.94□□□□□ -0.66
PTPRD-207ENST00000463477 LOXHD1Q8IVV2 1947 aa10.94□□□□□ -0.66
PTPRD-207ENST00000463477 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 TTC26A0AVF1 554 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 STAM2O75886 525 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 TDP2O95551 362 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
PTPRD-207ENST00000463477 TGFB3P10600 412 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 ACLYP53396 1101 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
PTPRD-207ENST00000463477 AP3B2Q13367 1082 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 LRRC26Q2I0M4 334 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 ARHGAP29Q52LW3 1261 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 ANKRD40Q6AI12 368 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 XRRA1Q6P2D8 792 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 KCNV1Q6PIU1 500 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 KIAA0895Q8NCT3 520 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 CNOT6LQ96LI5 555 aaKnown RBP10.93□□□□□ -0.66
PTPRD-207ENST00000463477 PLIN2Q99541 437 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRD-207ENST00000463477 V9GYY5 206 aaPredicted RBP10.93□□□□□ -0.66
PTPRD-207ENST00000463477 FRMPD4Q14CM0 1322 aa10.93□□□□□ -0.66
PTPRD-207ENST00000463477 MYADML2A6NDP7 307 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 MYMKA6NI61 221 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 RNF225M0QZC1 329 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ZEB2O60315 1214 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 RGS20O76081 388 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 NDUFA10O95299 355 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ASGR1P07306 291 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CCND2P30279 289 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ZBED6P86452 979 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 PPP2R3AQ06190 1150 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms