RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 TMEM266Q2M3C6 531 aa18.21■□□□□ 0.51
COL1A1-202ENST00000463440 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-202ENST00000463440 OSMRQ99650 979 aa18.21■□□□□ 0.51
COL1A1-202ENST00000463440 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.51
COL1A1-202ENST00000463440 CDH23Q9H251 3354 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 RFXAPO00287 272 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 DNM2P50570 870 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 NLRP11P59045 1033 aaKnown RBP18.2■□□□□ 0.5
COL1A1-202ENST00000463440 ERVK-21P61565 698 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 ANO5Q75V66 913 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 TMEM40Q8WWA1 233 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 TMX3Q96JJ7 454 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 JPH2Q9BR39 696 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-202ENST00000463440 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-202ENST00000463440 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-202ENST00000463440 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
COL1A1-202ENST00000463440 CHD7Q9P2D1 2997 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 TMEM150BA6NC51 233 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 EPOPA6NHQ4 379 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 WNT7AO00755 349 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 MCM7P33993 719 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 TXKP42681 527 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 CDC42EP1Q00587 391 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-202ENST00000463440 OTUD6AQ7L8S5 288 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 SPRED2Q7Z698 418 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-202ENST00000463440 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 C4orf19Q8IY42 314 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 LINC01599Q8WXQ3 324 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 DYDC2Q96IM9 177 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 SCLT1Q96NL6 688 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 CEP89Q96ST8 783 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 SH2D3AQ9BRG2 576 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 LXNQ9BS40 222 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 ST3GAL5Q9UNP4 418 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 PPME1Q9Y570 386 aa18.19■□□□□ 0.5
COL1A1-202ENST00000463440 TTC3P53804 2025 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 IGKV6-21A0A0C4DH24 114 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 DENND3A2RUS2 1198 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 MAFO75444 373 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-202ENST00000463440 POU3F3P20264 500 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-202ENST00000463440 GPC3P51654 580 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 PLA2G4FQ68DD2 849 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 NPAS4Q8IUM7 802 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL1A1-202ENST00000463440 NEK9Q8TD19 979 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 NLRP7Q8WX94 980 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 ADAMTS10Q9H324 1103 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 TMX1Q9H3N1 280 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-202ENST00000463440 RGL1Q9NZL6 768 aa18.18■□□□□ 0.5
COL1A1-202ENST00000463440 NOL7Q9UMY1 257 aaKnown RBP18.18■□□□□ 0.5
COL1A1-202ENST00000463440 CD2BP2O95400 341 aaKnown RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 EIF4BP23588 611 aaKnown RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 YWHABP31946 246 aaKnown RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 TRAPPC10P48553 1259 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 CYP4A11Q02928 519 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 GRB10Q13322 594 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 CTTNQ14247 550 aaKnown RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 CCDC85BQ15834 202 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 FAM228AQ86W67 206 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 TPH2Q8IWU9 490 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 MICALL1Q8N3F8 863 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 FIBCD1Q8N539 461 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 FBXO22Q8NEZ5 403 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 SLC7A3Q8WY07 619 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 ADAM2Q99965 735 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 EIF2AK1Q9BQI3 630 aaKnown RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 TMEM60Q9H2L4 133 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 C1orf112Q9NSG2 853 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 WRAP73Q9P2S5 460 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-202ENST00000463440 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 MTCH2Q9Y6C9 303 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 COL4A6Q14031 1691 aa18.17■□□□□ 0.5
COL1A1-202ENST00000463440 SLITRK3O94933 977 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL1A1-202ENST00000463440 RFC5P40937 340 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 SARSP49591 514 aaKnown RBP18.16■□□□□ 0.5
COL1A1-202ENST00000463440 NPEPPSP55786 919 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 DRP2Q13474 957 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 ZNF174Q15697 407 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 GDPD5Q8WTR4 605 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 ZNF668Q96K58 619 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-202ENST00000463440 C17orf80Q9BSJ5 609 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 RGS18Q9NS28 235 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 LMCD1Q9NZU5 365 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms