RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 A0A1W2PQJ5 194 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 UBA6A0AVT1 1052 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PRAMEF22A3QJZ6 481 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 C1QTNF9BB2RNN3 333 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 H3BML4 177 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ACOT7O00154 380 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 TBX3O15119 743 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 NPHP1O15259 732 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 UBXN7O94888 489 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 HRGP04196 525 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 SETSIPP0DME0 302 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 HALP42357 657 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 KIR2DL1P43626 348 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 KIR2DL2P43627 348 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 LGALS4P56470 323 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 CORO7P57737 925 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 MUM1Q2TAK8 710 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PGS1Q32NB8 556 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PRAMEF18Q5VWM3 479 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 TIGD7Q6NT04 549 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 CYP4F22Q6NT55 531 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 CD163Q86VB7 1156 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PRR18Q8N4B5 295 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ANKRD42Q8N9B4 389 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 HIPK4Q8NE63 616 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 NUP43Q8NFH3 380 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PNISRQ8TF01 805 aaKnown RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ASB11Q8WXH4 323 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 FOXRED1Q96CU9 486 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 TMEM60Q9H2L4 133 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 BHMT2Q9H2M3 363 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 CARS2Q9HA77 564 aaKnown RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PDLIM7Q9NR12 457 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ZC3H7BQ9UGR2 993 aaKnown RBP4.76□□□□□ -1.65
GPNMB-205ENST00000463011 TMPRSS11EQ9UL52 423 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 PCDHB4Q9Y5E5 795 aa4.76□□□□□ -1.65
GPNMB-205ENST00000463011 ABHD14A-ACY1A0A1B0GW23 586 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 CCDC154A6NI56 674 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 F5H423 210 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 GOLGA6L22H0YM25 854 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 SGSM2O43147 1006 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 B3GALT2O43825 422 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 NBNO60934 754 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ALDH2P05091 517 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ZGLP1P0C6A0 271 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ZKSCAN1P17029 563 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 PRKCAP17252 672 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ECE1P42892 770 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 SLC16A1P53985 500 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 FAM193AP78312 1265 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 IKZF1Q13422 519 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 SEMA5AQ13591 1074 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 TRIM25Q14258 630 aaKnown RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 TTC38Q5R3I4 469 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 RNF220Q5VTB9 566 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 PRAMEF9Q5VWM5 478 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 MBNL2Q5VZF2 373 aaKnown RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 BICRALQ6AI39 1079 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 DARS2Q6PI48 645 aaKnown RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 NPNTQ6UXI9 565 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 RTN4RL1Q86UN2 441 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ALYREFQ86V81 257 aaKnown RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 CILP2Q8IUL8 1156 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 LYSMD2Q8IV50 215 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 KIAA0319LQ8IZA0 1049 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 TMEM151AQ8N4L1 468 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 TSPEARQ8WU66 669 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 RIN2Q8WYP3 895 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-205ENST00000463011 CCDC138Q96M89 665 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 B3GNT5Q9BYG0 378 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 RXFP1Q9HBX9 757 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 LIMCH1Q9UPQ0 1083 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 POLHQ9Y253 713 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 TAF6LQ9Y6J9 622 aa4.75□□□□□ -1.65
GPNMB-205ENST00000463011 ST20-MTHFSA0A0A6YYL1 179 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-205ENST00000463011 FAM227AF5H4B4 570 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 DTNBO60941 627 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 IGLV1-40P01703 118 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 EDNRBP24530 442 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 HTR1BP28222 390 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 CD96P40200 585 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 GATA4P43694 442 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 SLC6A11P48066 632 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 PPM1FP49593 454 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-205ENST00000463011 BCAR1P56945 870 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 PRKCQQ04759 706 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 ADCY2Q08462 1091 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 MYBPC3Q14896 1274 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 TMEM95Q3KNT9 176 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 RALGPS1Q5JS13 557 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 GALNT18Q6P9A2 607 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms