RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 MCTP1Q6DN14 999 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 NEK9Q8TD19 979 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 ZSWIM4Q9H7M6 989 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 SUGCTQ9HAC7 445 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 CYP26B1Q9NR63 512 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 PADI3Q9ULW8 664 aa21.11■□□□□ 0.97
COL9A3-203ENST00000462700 CHD9Q3L8U1 2897 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 IGKV6-21A0A0C4DH24 114 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 POTEMA6NI47 508 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 YWHABP31946 246 aaKnown RBP21.1■□□□□ 0.97
COL9A3-203ENST00000462700 CRYBB1P53674 252 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-203ENST00000462700 FAM117BQ6P1L5 589 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 TMEM40Q8WWA1 233 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 MYLIPQ8WY64 445 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 TOP1MTQ969P6 601 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 RAD9AQ99638 391 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 OSMRQ99650 979 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 HSD17B14Q9BPX1 270 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 NOC2LQ9Y3T9 749 aaKnown RBP21.1■□□□□ 0.97
COL9A3-203ENST00000462700 MICAL3Q7RTP6 2002 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 CDH23Q9H251 3354 aa21.1■□□□□ 0.97
COL9A3-203ENST00000462700 MAFO75444 373 aaPredicted RBP21.09■□□□□ 0.97
COL9A3-203ENST00000462700 ARHGEF15O94989 841 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 NPEPPSP55786 919 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 NLRP11P59045 1033 aaKnown RBP21.09■□□□□ 0.97
COL9A3-203ENST00000462700 DRP2Q13474 957 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 TMEM266Q2M3C6 531 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 LARP1BQ659C4 914 aaKnown RBP21.09■□□□□ 0.97
COL9A3-203ENST00000462700 TPH2Q8IWU9 490 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 ZNF710Q8N1W2 664 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 PIAS4Q8N2W9 510 aaPredicted RBP21.09■□□□□ 0.97
COL9A3-203ENST00000462700 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 LINC01599Q8WXQ3 324 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 CEP170P1Q96L14 293 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 FTHL17Q9BXU8 183 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 ADAMTS10Q9H324 1103 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 ERVK-5Q9HDB9 667 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 PPME1Q9Y570 386 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 PCDHB6Q9Y5E3 794 aa21.09■□□□□ 0.97
COL9A3-203ENST00000462700 LCHNA4D1U4 455 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 ENPP3O14638 875 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 RPS6KA5O75582 802 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 LYPLA2O95372 231 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 TECP42680 631 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 GPC3P51654 580 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 TAP1Q03518 808 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 OTUD6AQ7L8S5 288 aa21.08■□□□□ 0.97
COL9A3-203ENST00000462700 ZNF579Q8NAF0 562 aaKnown RBP21.08■□□□□ 0.97
COL9A3-203ENST00000462700 JPH2Q9BR39 696 aaPredicted RBP21.08■□□□□ 0.97
COL9A3-203ENST00000462700 K7ELQ4 463 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-203ENST00000462700 ZBTB39O15060 712 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 UPP2O95045 317 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 DNM2P50570 870 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 HTRA4P83105 476 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-203ENST00000462700 NFX1Q12986 1120 aaKnown RBP21.07■□□□□ 0.96
COL9A3-203ENST00000462700 ODR4Q5SWX8 454 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 FAM228AQ86W67 206 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 SLC7A3Q8WY07 619 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 TMX1Q9H3N1 280 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 PRDM12Q9H4Q4 367 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 INSL6Q9Y581 213 aa21.07■□□□□ 0.96
COL9A3-203ENST00000462700 GPR182O15218 404 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 RFC5P40937 340 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 POLGP54098 1239 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 RILPL1Q5EBL4 403 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 XKR9Q5GH70 373 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 FAM43BQ6ZT52 329 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 RTN4RL1Q86UN2 441 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 EXOC8Q8IYI6 725 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 ZNF668Q96K58 619 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 TSPYL2Q9H2G4 693 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 DHX33Q9H6R0 707 aaKnown RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.06■□□□□ 0.96
COL9A3-203ENST00000462700 ST3GAL5Q9UNP4 418 aa21.06■□□□□ 0.96
COL9A3-203ENST00000462700 SPATA31C1P0DKV0 1188 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 FOSL2P15408 326 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 FXR2P51116 673 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL9A3-203ENST00000462700 CDC42EP1Q00587 391 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 PTGDRQ13258 359 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 SP7Q8TDD2 431 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-203ENST00000462700 NLRP7Q8WX94 980 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 INTS4Q96HW7 963 aaKnown RBP21.05■□□□□ 0.96
COL9A3-203ENST00000462700 SCLT1Q96NL6 688 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 TUFT1Q9NNX1 390 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 ANKEF1Q9NU02 776 aa21.05■□□□□ 0.96
COL9A3-203ENST00000462700 SUCLA2Q9P2R7 463 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-203ENST00000462700 LINC01553A4QN01 128 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 LAD1O00515 517 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 MGEA5O60502 916 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 MED24O75448 989 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 DARSP14868 501 aaKnown RBP21.04■□□□□ 0.96
COL9A3-203ENST00000462700 EIF4BP23588 611 aaKnown RBP21.04■□□□□ 0.96
COL9A3-203ENST00000462700 SPRED2Q7Z698 418 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 CATSPER3Q86XQ3 398 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 ERMNQ8TAM6 284 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 SNX21Q969T3 373 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 YME1L1Q96TA2 773 aa21.04■□□□□ 0.96
COL9A3-203ENST00000462700 GAS2L1Q99501 681 aaPredicted RBP21.04■□□□□ 0.96
COL9A3-203ENST00000462700 POLR3CQ9BUI4 534 aaPredicted RBP21.04■□□□□ 0.96
COL9A3-203ENST00000462700 CERS4Q9HA82 394 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms