RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 NT5DC3Q86UY8 548 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 VPS36Q86VN1 386 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 DNAAF5Q86Y56 855 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SYCE1Q8N0S2 351 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 ARFGAP2Q8N6H7 521 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PRPF38AQ8NAV1 312 aaKnown RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 IPO4Q8TEX9 1081 aaKnown RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 ATP8B4Q8TF62 1192 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 U2AF1L4Q8WU68 220 aaKnown RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SEC14L1Q92503 715 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 MKL1Q969V6 931 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 BORCS6Q96GS4 357 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 HES6Q96HZ4 224 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SYT11Q9BT88 431 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 POLR3CQ9BUI4 534 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 AP1M1Q9BXS5 423 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 POLD4Q9HCU8 107 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 NYAP2Q9P242 653 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SLC12A6Q9UHW9 1150 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 TTC7AQ9ULT0 858 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-204ENST00000462539 DNM3Q9UQ16 869 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 PCDHA1Q9Y5I3 950 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 SMCHD1A6NHR9 2005 aa8.06□□□□□ -1.12
SREBF2-204ENST00000462539 FRMPD4Q14CM0 1322 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 IGSF9BQ9UPX0 1349 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 KLRG2A4D1S0 409 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 C5orf60A6NFR6 353 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 GOLGA6L10A6NI86 522 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 TMCO5BA8MYB1 307 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 F8VZ95 297 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 GCOM1H8Y6P7 765 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 KRIT1O00522 736 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 MSH4O15457 936 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 DDX3YO15523 660 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 TGFB1I1O43294 461 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 GCNT3O95395 438 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 FAM107AO95990 144 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 TMEM253P0C7T8 217 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 MYZAPP0CAP1 466 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 ITGA4P13612 1032 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 EEF2P13639 858 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 GUCY2CP25092 1073 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 RPL13P26373 211 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SOX5P35711 763 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 STAT1P42224 750 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 CASP4P49662 377 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 GTF2A1P52655 376 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 POU5F1Q01860 360 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 DDR1Q08345 913 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 PLCB4Q15147 1175 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SLC15A2Q16348 729 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 PTPROQ16827 1216 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SPDYCQ5MJ68 293 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 HHIPL2Q6UWX4 724 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 RUFY4Q6ZNE9 571 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 TMC3Q7Z5M5 1100 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 DDX42Q86XP3 938 aaKnown RBP eCLIP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SP8Q8IXZ3 490 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 C3orf20Q8ND61 904 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 OR2W6PQ8NHA6 318 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 SLC30A5Q8TAD4 765 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 LMBR1Q8WVP7 490 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 RFFLQ8WZ73 363 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 CCT8L2Q96SF2 557 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 MKNK1Q9BUB5 465 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 TXLNGYQ9BZA5 131 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 DDX47Q9H0S4 455 aaKnown RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 OLFML3Q9NRN5 406 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 FAM114A2Q9NRY5 505 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 AMFRQ9UKV5 643 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 RABGAP1Q9Y3P9 1069 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 DAAM1Q9Y4D1 1078 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 BRWD3Q6RI45 1802 aa8.05□□□□□ -1.12
SREBF2-204ENST00000462539 COL2A1P02458 1487 aaPredicted RBP8.05□□□□□ -1.12
SREBF2-204ENST00000462539 WDR81Q562E7 1941 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 RIMBP2O15034 1052 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CLIC2O15247 247 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TTI1O43156 1089 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 DAPK3O43293 454 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 EVI5O60447 810 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 ABCB7O75027 752 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 PPFIA2O75334 1257 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FAM13AO94988 1023 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FOSP01100 380 aaPredicted RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CYP3A4P08684 503 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TAL1P17542 331 aaPredicted RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 LMNB1P20700 586 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 HNRNPH1P31943 449 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 HPDP32754 393 aaPredicted RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CTNNA1P35221 906 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FLT3P36888 993 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 SCNN1DP51172 638 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms