RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 BAP1Q92560 729 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 SYN2Q92777 582 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-204ENST00000461897 PDCD2LQ9BRP1 358 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
COL4A6-204ENST00000461897 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 KCNH4Q9UQ05 1017 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 STK24Q9Y6E0 443 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 NKRFO15226 690 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 PEX10O60683 326 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 SHOX2O60902 331 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CLSTN1O94985 981 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CYP11B2P19099 503 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 PPIL2Q13356 520 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 PLS1Q14651 629 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CAPZA3Q96KX2 299 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 RIT2Q99578 217 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 HSD17B14Q9BPX1 270 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 ACAD9Q9H845 621 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 JADE2Q9NQC1 790 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 MACROD2A1Z1Q3 448 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 AGPSO00116 658 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CXCL11O14625 94 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 EPHB6O15197 1021 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 ZNF185O15231 689 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 MYBL2P10244 700 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 MOGSQ13724 837 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 ZCWPW2Q504Y3 356 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 LRRC31Q6UY01 552 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 OPTNQ96CV9 577 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 AGO4Q9HCK5 861 aaKnown RBP13.65□□□□□ -0.22
COL4A6-204ENST00000461897 SLC39A2Q9NP94 309 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CYP39A1Q9NYL5 469 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
COL4A6-204ENST00000461897 MYO1CO00159 1063 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 TRAF5O00463 557 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 DHX15O43143 795 aaKnown RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 SLITRK3O94933 977 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 COASYQ13057 564 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 MTMR1Q13613 665 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 ARSHQ5FYA8 562 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 LDLRAD1Q5T700 205 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 ARHGEF16Q5VV41 709 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 DYDC2Q96IM9 177 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 ALS2CR12Q96Q35 445 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 TUFT1Q9NNX1 390 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 PKD2L1Q9P0L9 805 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 DNM3Q9UQ16 869 aa13.64□□□□□ -0.23
COL4A6-204ENST00000461897 RRP15Q9Y3B9 282 aaKnown RBP13.64□□□□□ -0.23
COL4A6-204ENST00000461897 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 GJA5P36382 358 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 TNNT3P45378 269 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 CTTNQ14247 550 aaKnown RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 GLE1Q53GS7 698 aaKnown RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 SYT2Q8N9I0 419 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 GLIS3Q8NEA6 775 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 SPATA4Q8NEY3 305 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 OSBPL9Q96SU4 736 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 WRAP73Q9P2S5 460 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 KIAA1217Q5T5P2 1943 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 DDX39AO00148 427 aaKnown RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 GGCXP38435 758 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 C2orf54Q08AI8 447 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 EEF2KMTQ96G04 330 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 PANK4Q9NVE7 773 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-204ENST00000461897 LCMT1Q9UIC8 334 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms