RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SEZ6L2Q6UXD5 910 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 CCDC144CPQ8IYA2 1237 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 KBTBD3Q8NAB2 608 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 FBLIM1Q8WUP2 373 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 FAM151AQ8WW52 585 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 PUS7LQ9H0K6 701 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 PRKAB1Q9Y478 270 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 PPP2R3BQ9Y5P8 575 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 ATRNL1Q5VV63 1379 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 RASSF10A6NK89 507 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 ERC2O15083 957 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 USP2O75604 605 aaPredicted RBP9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 ASMTLO95671 621 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 PRKG1Q13976 671 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 UBE3CQ15386 1083 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 TCEA2Q15560 299 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 FOXB2Q5VYV0 432 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 SYNPOQ8N3V7 929 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 OSBP2Q969R2 916 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 NACC1Q96RE7 527 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 APBA2Q99767 749 aa9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 MKRN2Q9H000 416 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 SLKQ9H2G2 1235 aaPredicted RBP9.59□□□□□ -0.87
ECHDC1-212ENST00000461239 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 AGRPO00253 132 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 PRKAB2O43741 272 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 ENTPD3O75355 529 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 GSPT1P15170 499 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 PICALMQ13492 652 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 TNFAIP1Q13829 316 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 ADGRE1Q14246 886 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 MBTPS1Q14703 1052 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 ZC3H12BQ5HYM0 836 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 CDH24Q86UP0 819 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 LCORLQ8N3X6 602 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 FGD4Q96M96 766 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 OSBPL5Q9H0X9 879 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 ZNF451Q9Y4E5 1061 aa9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 RPAP1Q9BWH6 1393 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-212ENST00000461239 FLT1P17948 1338 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 FAM155AB1AL88 458 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 RNF113AO15541 343 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 MBD4O95243 580 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 BAG3O95817 575 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 CAPNS1P04632 268 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 HUNKP57058 714 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 RNF4P78317 190 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 CYP4F22Q6NT55 531 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 MIGA2Q7L4E1 593 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 ZNF227Q86WZ6 799 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 MAPKAPK5Q8IW41 473 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 ARMC10Q8N2F6 343 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 C2orf69Q8N8R5 385 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 CLMNQ96JQ2 1002 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 MEGF10Q96KG7 1140 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 EXOC2Q96KP1 924 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 MYRFLQ96LU7 910 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 BRINP2Q9C0B6 783 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 ARMT1Q9H993 441 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 TMOD2Q9NZR1 351 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 ABT1Q9ULW3 272 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 PAPPA2Q9BXP8 1791 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 CDK5RAP2Q96SN8 1893 aa9.57□□□□□ -0.88
ECHDC1-212ENST00000461239 M0R2C6 588 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 FOXP2O15409 715 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 DNAJC6O75061 913 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 ITGAVP06756 1048 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 CD247P20963 164 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 FKBP1BP68106 108 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 AUHQ13825 339 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 RRP1BQ14684 758 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 ZMYM1Q5SVZ6 1142 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 TTC22Q5TAA0 569 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 SDR42E1Q8WUS8 393 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 RNF141Q8WVD5 230 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 KISS1RQ969F8 398 aaPredicted RBP9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 EVI5LQ96CN4 794 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 HHIPL1Q96JK4 782 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 CCDC136Q96JN2 1154 aa9.56□□□□□ -0.88
ECHDC1-212ENST00000461239 FBXL18Q96ME1 805 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms