RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ARP10275 920 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 DSC3Q14574 896 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 LINC01465Q8N7H1 131 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 PBXIP1Q96AQ6 731 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 NECTIN4Q96NY8 510 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 ESYT1Q9BSJ8 1104 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 CWH43Q9H720 699 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 NOC2LQ9Y3T9 749 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-207ENST00000461228 SPTBN4Q9H254 2564 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 BACH1O14867 736 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 MAGEB2O15479 319 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 ST18O60284 1047 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 NFX1Q12986 1120 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 RTN1Q16799 776 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 PDXDC2PQ6P474 469 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM186AA6NE01 2351 aa16.53■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM86B1E9PN63 330 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 ZBTB43O43298 467 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 GPR32O75388 356 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 FAM86B2P0C5J1 330 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 GATMP50440 423 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 ITIH3Q06033 890 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 TCF15Q12870 199 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 COL9A3Q14050 684 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 TMEM266Q2M3C6 531 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 UBALD2Q8IYN6 164 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 CASP10Q92851 521 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 ZMYND12Q9H0C1 365 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 NR2E1Q9Y466 385 aa16.52■□□□□ 0.24
DNMT3A-207ENST00000461228 RIF1Q5UIP0 2472 aaKnown RBP16.52■□□□□ 0.23
DNMT3A-207ENST00000461228 GVINP1Q7Z2Y8 2422 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 CACNA1AO00555 2505 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 HMGB1P09429 215 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 CIITAP33076 1130 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 KRT32Q14532 448 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 PFKFB3Q16875 520 aaPredicted RBP16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 ZNF558Q96NG5 402 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 OSMRQ99650 979 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 TYW1Q9NV66 732 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 STK39Q9UEW8 545 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 IRAK3Q9Y616 596 aa16.51■□□□□ 0.23
DNMT3A-207ENST00000461228 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 PROB1E7EW31 1015 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 PSAPP07602 524 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 ATP4AP20648 1035 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 ERVFC1P60507 584 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 KIZQ2M2Z5 673 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 SPOUT1Q5T280 376 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 SYCE2Q6PIF2 218 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 REXO1Q8N1G1 1221 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 TCF25Q9BQ70 676 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 PCDHA10Q9Y5I2 948 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 DCHS1Q96JQ0 3298 aa16.5■□□□□ 0.23
DNMT3A-207ENST00000461228 WDR64B1ANS9 1081 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 EOMESO95936 686 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 EIF4BP23588 611 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 TMOD1P28289 359 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 KRT17Q04695 432 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 MTMR3Q13615 1198 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 SMC1AQ14683 1233 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 KCNT2Q6UVM3 1135 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 ZNF577Q9BSK1 485 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 ENTPD7Q9NQZ7 604 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms