RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 KIZQ2M2Z5 673 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 ZNF710Q8N1W2 664 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 MTMR9Q96QG7 549 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 PPP1R16BQ96T49 567 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 TTC12Q9H892 705 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-207ENST00000461195 SUGCTQ9HAC7 445 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 CHD7Q9P2D1 2997 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
TRAF4-207ENST00000461195 ENPP3O14638 875 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 GPR32O75388 356 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 TXKP42681 527 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 HTRA4P83105 476 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-207ENST00000461195 ODR4Q5SWX8 454 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 ANO5Q75V66 913 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 CEP89Q96ST8 783 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 LXNQ9BS40 222 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 CERS4Q9HA82 394 aa25.22■■□□□ 1.63
TRAF4-207ENST00000461195 RPS6KA5O75582 802 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 ORC2Q13416 577 aaPredicted RBP25.21■■□□□ 1.63
TRAF4-207ENST00000461195 TMEM266Q2M3C6 531 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 FAM43BQ6ZT52 329 aaPredicted RBP25.21■■□□□ 1.63
TRAF4-207ENST00000461195 C4orf19Q8IY42 314 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 TMEM40Q8WWA1 233 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 DYDC2Q96IM9 177 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 OSMRQ99650 979 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 SH2D3AQ9BRG2 576 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 TMEM60Q9H2L4 133 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 RGL1Q9NZL6 768 aa25.21■■□□□ 1.63
TRAF4-207ENST00000461195 WRAP73Q9P2S5 460 aaPredicted RBP25.21■■□□□ 1.63
TRAF4-207ENST00000461195 NOL7Q9UMY1 257 aaKnown RBP25.21■■□□□ 1.63
TRAF4-207ENST00000461195 NOC2LQ9Y3T9 749 aaKnown RBP25.21■■□□□ 1.63
TRAF4-207ENST00000461195 U2AF2P26368 475 aaKnown RBP eCLIP25.2■■□□□ 1.621e-6■□□□□ 8.6
TRAF4-207ENST00000461195 GJB2P29033 226 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 TRAPPC10P48553 1259 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 NLRP11P59045 1033 aaKnown RBP25.2■■□□□ 1.62
TRAF4-207ENST00000461195 NFX1Q12986 1120 aaKnown RBP25.2■■□□□ 1.62
TRAF4-207ENST00000461195 PLA2G4FQ68DD2 849 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 ARNTL2Q8WYA1 636 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 YME1L1Q96TA2 773 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 ZSWIM4Q9H7M6 989 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 ERVK-5Q9HDB9 667 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 CYP26B1Q9NR63 512 aa25.2■■□□□ 1.62
TRAF4-207ENST00000461195 TTC3P53804 2025 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 IGKV6-21A0A0C4DH24 114 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 LINC01553A4QN01 128 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 GPR182O15218 404 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 DNM2P50570 870 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 CYP4A11Q02928 519 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 ADGRE1Q14246 886 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 CTTNQ14247 550 aaKnown RBP25.19■■□□□ 1.62
TRAF4-207ENST00000461195 ZNF174Q15697 407 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 TTC38Q5R3I4 469 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 NEK9Q8TD19 979 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 SP7Q8TDD2 431 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-207ENST00000461195 LINC01599Q8WXQ3 324 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 EIF2AK1Q9BQI3 630 aaKnown RBP25.19■■□□□ 1.62
TRAF4-207ENST00000461195 JPH2Q9BR39 696 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-207ENST00000461195 ADAMTS10Q9H324 1103 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 PPME1Q9Y570 386 aa25.19■■□□□ 1.62
TRAF4-207ENST00000461195 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.19■■□□□ 1.62
TRAF4-207ENST00000461195 MAFO75444 373 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-207ENST00000461195 IGFBP4P22692 258 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 OTUD6AQ7L8S5 288 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 RTN4RL1Q86UN2 441 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-207ENST00000461195 TPH2Q8IWU9 490 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 CEP170P1Q96L14 293 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 TGS1Q96RS0 853 aaKnown RBP25.18■■□□□ 1.62
TRAF4-207ENST00000461195 TSPYL2Q9H2G4 693 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-207ENST00000461195 TMX1Q9H3N1 280 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 ST3GAL5Q9UNP4 418 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 SMC3Q9UQE7 1217 aa25.18■■□□□ 1.62
TRAF4-207ENST00000461195 SLITRK3O94933 977 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 YWHABP31946 246 aaKnown RBP25.17■■□□□ 1.62
TRAF4-207ENST00000461195 GPC3P51654 580 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 NPEPPSP55786 919 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 CDC42EP1Q00587 391 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 DRP2Q13474 957 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 SPRED2Q7Z698 418 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 FAM228AQ86W67 206 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 EXOC8Q8IYI6 725 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 HSD17B14Q9BPX1 270 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 COL4A6Q14031 1691 aa25.17■■□□□ 1.62
TRAF4-207ENST00000461195 ARID2Q68CP9 1835 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 EPOPA6NHQ4 379 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 RFXAPO00287 272 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 OR52Z1P0C646 297 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 EIF4BP23588 611 aaKnown RBP25.16■■□□□ 1.62
TRAF4-207ENST00000461195 ERVK-21P61565 698 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 SLC7A3Q8WY07 619 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 SCLT1Q96NL6 688 aa25.16■■□□□ 1.62
TRAF4-207ENST00000461195 POTEMA6NI47 508 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 H3BQV1 296 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 LYPLA2O95372 231 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 RFC5P40937 340 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 POLGP54098 1239 aaPredicted RBP25.15■■□□□ 1.62
TRAF4-207ENST00000461195 MCTP1Q6DN14 999 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 NPAS4Q8IUM7 802 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 ZNF579Q8NAF0 562 aaKnown RBP25.15■■□□□ 1.62
TRAF4-207ENST00000461195 NLRP7Q8WX94 980 aa25.15■■□□□ 1.62
TRAF4-207ENST00000461195 ZNF668Q96K58 619 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms