RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PCDHGA2Q9Y5H1 932 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TIMM13Q9Y5L4 95 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 HCFC2Q9Y5Z7 792 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TRIM75PA6NK02 468 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 GOLGA8AA7E2F4 631 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 GOLGA8BA8MQT2 603 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 DVL2O14641 736 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TRIM13O60858 407 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 IFIT2P09913 472 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 ZBTB48P10074 688 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 LPOP22079 712 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 KCNC1P48547 511 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 NEK3P51956 506 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 KIF11P52732 1056 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PHC1P78364 1004 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 SMAD3P84022 425 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 GTF2H3Q13889 308 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 NFIXQ14938 502 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PDCD1Q15116 288 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 SMAD2Q15796 467 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 ARHGAP29Q52LW3 1261 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 ARHGAP36Q6ZRI8 547 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 CEP68Q76N32 757 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 RASSF3Q86WH2 238 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PTRH1Q86Y79 214 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 DCP2Q8IU60 420 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 TGFBRAP1Q8WUH2 860 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 C20orf173Q96LM9 149 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 DDX20Q9UHI6 824 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 NOC2LQ9Y3T9 749 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 TCRBV5S4A2TA0A5A2 114 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 KLHL33A6NCF5 533 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 ERC2O15083 957 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 KDM1AO60341 852 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 ZRANB2O95218 330 aaKnown RBP eCLIP3.77□□□□□ -1.81
HPS3-203ENST00000460822 COL6A2P12110 1019 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 IGFBP6P24592 240 aaPredicted RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 PTX3P26022 381 aaPredicted RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 LSP1P33241 339 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 GPR3P46089 330 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 CAP1Q01518 475 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 PICALMQ13492 652 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 DHX8Q14562 1220 aaKnown RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 ACAP2Q15057 778 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 C4orf46Q504U0 113 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 EFCAB2Q5VUJ9 269 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 CPZQ66K79 652 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 HHIPL2Q6UWX4 724 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 TEX2Q8IWB9 1127 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 ZDHHC14Q8IZN3 488 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 PJA1Q8NG27 643 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 FBXO41Q8TF61 875 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 LMBR1Q8WVP7 490 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 DPF3Q92784 378 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 DDX11Q96FC9 970 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 AIFM3Q96NN9 605 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 NUP88Q99567 741 aaPredicted RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 MTA3Q9BTC8 594 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 CCM2LQ9NUG4 571 aaPredicted RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 USP25Q9UHP3 1055 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 SAP30BPQ9UHR5 308 aaKnown RBP3.77□□□□□ -1.81
HPS3-203ENST00000460822 FAM50BQ9Y247 325 aa3.77□□□□□ -1.81
HPS3-203ENST00000460822 IFRD1O00458 451 aaPredicted RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 NKRFO15226 690 aaKnown RBP eCLIP3.76□□□□□ -1.81
HPS3-203ENST00000460822 HIP1RO75146 1068 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 NTRK1P04629 796 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 ATF2P15336 505 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 GBX1Q14549 363 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 GPR19Q15760 415 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 IFIT1BQ5T764 474 aaKnown RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 TTLL7Q6ZT98 887 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 NOSTRINQ8IVI9 506 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 ZNF610Q8N9Z0 462 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 FEZF2Q8TBJ5 459 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 EVI5LQ96CN4 794 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 TRMT2BQ96GJ1 504 aaKnown RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 TEKT5Q96M29 485 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 BCAS3Q9H6U6 928 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 PCDH18Q9HCL0 1135 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 NMRK2Q9NPI5 230 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 USP40Q9NVE5 1235 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 COA3Q9Y2R0 106 aaPredicted RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 FRMPD2Q68DX3 1309 aaPredicted RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 OTOL1A6NHN0 477 aaPredicted RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 C22orf46C9J442 243 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 H7BY64 318 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 SCDO00767 359 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 APAF1O14727 1248 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 PPP1R11O60927 126 aaPredicted RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 SYN1P17600 705 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 SPIRE1Q08AE8 756 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 GALEQ14376 348 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 SAFBQ15424 915 aaKnown RBP eCLIP3.76□□□□□ -1.81
HPS3-203ENST00000460822 LONRF3Q496Y0 759 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 COBLL1Q53SF7 1204 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 ESRP1Q6NXG1 681 aaKnown RBP3.76□□□□□ -1.81
HPS3-203ENST00000460822 B3GNT8Q7Z7M8 397 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 CD244Q9BZW8 370 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 ZDHHC5Q9C0B5 715 aa3.76□□□□□ -1.81
HPS3-203ENST00000460822 SLC12A5Q9H2X9 1139 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms