RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 DDAH1O94760 285 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 NDUFB10O96000 172 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 B3GALT4O96024 378 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 PDHBP11177 359 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CPA1P15085 419 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 PDIA3P30101 505 aaKnown RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CD96P40200 585 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 NEK4P51957 841 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF543Q08ER8 600 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 WTAPQ15007 396 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 ANKRD1Q15327 319 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 SPRED3Q2MJR0 410 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 TMEM67Q5HYA8 995 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 IFIT1BQ5T764 474 aaKnown RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 APOA5Q6Q788 366 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CHST3Q7LGC8 479 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 ANKRD23Q86SG2 305 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CCDC84Q86UT8 332 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 FAM181AQ8N9Y4 354 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 DCAF4Q8WV16 495 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 SNX21Q969T3 373 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 CAPNS2Q96L46 248 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 SLC38A3Q99624 504 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 UPF3BQ9BZI7 483 aaKnown RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 RAD18Q9NS91 495 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 PDRG1Q9NUG6 133 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 BAZ2BQ9UIF8 2168 aaKnown RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 MYH4Q9Y623 1939 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 WDR33Q9C0J8 1336 aaKnown RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ERICH2A1L162 156 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 TRIM75PA6NK02 468 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 BTBD19C9JJ37 291 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ATP2A1O14983 1001 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 WDR46O15213 610 aaKnown RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 PFKFB2O60825 505 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF865P0CJ78 1059 aaPredicted RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 CALM1P0DP23 149 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 CALM2P0DP24 149 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 CALM3P0DP25 149 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 VCAM1P19320 739 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 MCM2P49736 904 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 AK2P54819 239 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 HMGCS2P54868 508 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 KIF23Q02241 960 aaPredicted RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 EHHADHQ08426 723 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 GRM4Q14833 912 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 NTRK3Q16288 839 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 SLC35G1Q2M3R5 365 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 GPATCH4Q5T3I0 446 aaKnown RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ALKBH2Q6NS38 261 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 Q6ZUG5 572 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF654Q8IZM8 581 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 FANCBQ8NB91 859 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 TCEANC2Q96MN5 208 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 RIOX1Q9H6W3 641 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 TOMM22Q9NS69 142 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 HOXC10Q9NYD6 342 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 MAD2L2Q9UI95 211 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 TPCN1Q9ULQ1 816 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ABT1Q9ULW3 272 aaKnown RBP6.56□□□□□ -1.36
PTPN12-209ENST00000460731 STX8Q9UNK0 236 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 LOC285556D6RIA3 1793 aa6.56□□□□□ -1.36
PTPN12-209ENST00000460731 ADGRA2Q96PE1 1338 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 THSD7BQ9C0I4 1608 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 A0A1W2PP55 124 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN12-209ENST00000460731 GNAQP50148 359 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 COG2Q14746 738 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 ASPRV1Q53RT3 343 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 TREML2Q5T2D2 321 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 CATIPQ7Z7H3 387 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 FAM43AQ8N2R8 423 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
PTPN12-209ENST00000460731 REPS2Q8NFH8 660 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 BRF1Q92994 677 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 ZSCAN31Q96LW9 406 aaPredicted RBP6.55□□□□□ -1.36
PTPN12-209ENST00000460731 LZTS2Q9BRK4 669 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 SPZ1Q9BXG8 430 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 LRRC2Q9BYS8 371 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 MAF1Q9H063 256 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 KAT14Q9H8E8 782 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 FEM1BQ9UK73 627 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 LIMCH1Q9UPQ0 1083 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 SLC12A7Q9Y666 1083 aa6.55□□□□□ -1.36
PTPN12-209ENST00000460731 CCL15-CCL14A0A0B4J2E2 113 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CCDC196A0A1B0GTZ2 297 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 KLRF2D3W0D1 207 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ZBTB43O43298 467 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CA12O43570 354 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CYTH3O43739 400 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 IFNAR1P17181 557 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CFPP27918 469 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms