RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CEP72Q9P209 647 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 A0A087X0T9 212 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 ZNF263O14978 683 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 ASNSP08243 561 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 FAM228BP0C875 321 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 HDLBPQ00341 1268 aaKnown RBP16.77■□□□□ 0.28
LMNB1-203ENST00000460265 SPP2Q13103 211 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 NAA25Q14CX7 972 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 CEP85LQ5SZL2 805 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 FAM102BQ5T8I3 360 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 SAMD7Q7Z3H4 446 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 FAM151AQ8WW52 585 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 LXNQ9BS40 222 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 TRIM31Q9BZY9 425 aa16.77■□□□□ 0.28
LMNB1-203ENST00000460265 RASSF10A6NK89 507 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 BACH1O14867 736 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 ZEB2O60315 1214 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 CETN1Q12798 172 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 PPFIA1Q13136 1202 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 CEP63Q96MT8 703 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 NACC1Q96RE7 527 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 HPCAL4Q9UM19 191 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 SIK3Q9Y2K2 1263 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 NRAPQ86VF7 1730 aa16.77■□□□□ 0.27
LMNB1-203ENST00000460265 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 AKAP3O75969 853 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 SREBF1P36956 1147 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 STAT1P42224 750 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 KCNMA1Q12791 1236 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 COG2Q14746 738 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 XKR9Q5GH70 373 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 RINT1Q6NUQ1 792 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
LMNB1-203ENST00000460265 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 MYH10P35580 1976 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 KLRC1P26715 233 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
LMNB1-203ENST00000460265 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 ALKBH5Q6P6C2 394 aaKnown RBP16.76■□□□□ 0.27
LMNB1-203ENST00000460265 OSBPL9Q96SU4 736 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 VCPKMTQ9H867 229 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 MYH1P12882 1939 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 TMEM150BA6NC51 233 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 GOLGA6BA6NDN3 693 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 RPS6KA1Q15418 735 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 TATDN1Q6P1N9 297 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
LMNB1-203ENST00000460265 TCP1P17987 556 aaKnown RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 PRELPP51888 382 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 ARHGEF16Q5VV41 709 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 DAAM2Q86T65 1068 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 KIRREL3Q8IZU9 778 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 KRT12Q99456 494 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 PDE2AO00408 941 aaPredicted RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 NFIBO00712 420 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 EYA4O95677 639 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 SPATA31C1P0DKV0 1188 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 TNFAIP3P21580 790 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 PSMC2P35998 433 aaKnown RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 CALR3Q96L12 384 aaKnown RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
LMNB1-203ENST00000460265 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 MEA1Q16626 185 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 PEX26Q7Z412 305 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 IQCDQ96DY2 449 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 MTMR8Q96EF0 704 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
LMNB1-203ENST00000460265 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 UCHL3P15374 230 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 USP14P54578 494 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 PTK2Q05397 1052 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 CXCL9Q07325 125 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 PURBQ96QR8 312 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 METTL14Q9HCE5 456 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 KLC4Q9NSK0 619 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 SNX12Q9UMY4 172 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 EZRP15311 586 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 GBP2P32456 591 aaPredicted RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■□□□ 13.8
LMNB1-203ENST00000460265 GRIPAP1Q4V328 841 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 PADI6Q6TGC4 694 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 A1CFQ9NQ94 594 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 TYW1Q9NV66 732 aaKnown RBP16.74■□□□□ 0.27
LMNB1-203ENST00000460265 MCM8Q9UJA3 840 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 ZNRF3Q9ULT6 936 aa16.74■□□□□ 0.27
LMNB1-203ENST00000460265 TMX2Q9Y320 296 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms