RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TFDP1Q14186 410 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
HDAC4-206ENST00000460235 MCM6Q14566 821 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 ECM1Q16610 540 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 KLHL40Q2TBA0 621 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 STXBP4Q6ZWJ1 553 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 METTL13Q8N6R0 699 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
HDAC4-206ENST00000460235 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 DHX33Q9H6R0 707 aaKnown RBP13.7□□□□□ -0.22
HDAC4-206ENST00000460235 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 HDAC6Q9UBN7 1215 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 SEL1LQ9UBV2 794 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
HDAC4-206ENST00000460235 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 PVALEFA0A1B0GWK0 134 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
HDAC4-206ENST00000460235 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
HDAC4-206ENST00000460235 NR1I2O75469 434 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 FAM13AO94988 1023 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 STBD1O95210 358 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 KIF20AO95235 890 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 PTGS1P23219 599 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 RTP1P59025 263 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 PSMC6P62333 389 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 IGBP1P78318 339 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
HDAC4-206ENST00000460235 EMC2Q15006 297 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 NFKBIBQ15653 356 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 TNS4Q8IZW8 715 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 GOLPH3LQ9H4A5 285 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-206ENST00000460235 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
HDAC4-206ENST00000460235 DOCK5Q9H7D0 1870 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-206ENST00000460235 CYP2C9P11712 490 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 LIG1P18858 919 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 AFMP43652 599 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 NPEPPSP55786 919 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 ASIC1P78348 528 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 PSMD2Q13200 908 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 PTK7Q13308 1070 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 BFSP2Q13515 415 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 POSTNQ15063 836 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 PTGISQ16647 500 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 NAALADL2Q58DX5 795 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 ODR4Q5SWX8 454 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 CCDC183Q5T5S1 534 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 FAM102BQ5T8I3 360 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 PLA2G4FQ68DD2 849 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 SLC43A3Q8NBI5 491 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 DDX12PQ92771 950 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 GSDMAQ96QA5 445 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 HTATIP2Q9BUP3 242 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-206ENST00000460235 PARVGQ9HBI0 331 aa13.68□□□□□ -0.22
HDAC4-206ENST00000460235 A0A087X0B3 334 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 IGKV6-21A0A0C4DH24 114 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
HDAC4-206ENST00000460235 C22orf31O95567 290 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 COL6A1P12109 1028 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 IDEP14735 1019 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 HOXC8P31273 242 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 PPP1R2P41236 205 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-206ENST00000460235 DMP1Q13316 513 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-206ENST00000460235 ALCAMQ13740 583 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 KCNK18Q7Z418 384 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
HDAC4-206ENST00000460235 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-206ENST00000460235 AKT3Q9Y243 479 aa13.67□□□□□ -0.22
HDAC4-206ENST00000460235 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 ZBTB39O15060 712 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 TRAK2O60296 914 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
HDAC4-206ENST00000460235 CDK7P50613 346 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 EFNA5P52803 228 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms